Gambusia affinis (western mosquitofish): 122839943
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Entry
122839943 CDS
T07758
Name
(RefSeq) transient receptor potential cation channel subfamily M member 2-like isoform X1
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122839943
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122839943
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
122839943
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122839943
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
LDcluster4
CNPase
HR1
Motif
Other DBs
NCBI-GeneID:
122839943
NCBI-ProteinID:
XP_043987924
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Position
LG11:21342011..21361200
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AA seq
1201 aa
AA seq
DB search
MSDAQGGTKKNRREKEKKKGESIFLMDSPRPFATSPNSSSVPNQQDKINQQISTWIKNNI
TKKECCPNKDSSNKDVFREYSELDSIDKASKPEDFKKQTCNEDQHVQEVSTDAFGDIHFD
GIWHKSSKYVRVFADTKPEVLYELLTKIWKLPPPNLVISVTGGGNNFYLKSHLTKAFHRG
LIKVAQTTGAWIITGGTHSGVMMHVGQAVRDCTLSNITKPKIVAIGVAPWGVIHKRDNLI
NKEGCFPAHYKIDTQGQGDLTCLDDNHSHLLLVDNGISGRNAYSTEIQLRTELEKYISDK
ALGPKVTTKKTLVVCVVLDGGQGTLDTVYNAIEKGTPCVILQGSGRIADVIAHVSEFPTS
KIKPPLIKELVKKFFGKESKTINDEKIKAWTEKICAIVQKPDLLTIFKARSGDQGVLDVA
ILDALLKAFKTATSEEDLCWKKQLDLAISWNRVDSAETKIFTEETIWKSSELHQFMRLAL
VGNKPDFVSLLLENGVCLEDFLDENTLCQLYKNLPNCLFLYKLFKMEKFTKTSSRKKALN
MKSLDEARKNITLTNVSIEVRHLLGKFTKYIYPLSKVGEHTVQIDKDDESKRDAARDLFL
WAVVQNNKELSIIAWDQCRDCISAALAASKILKKMAKESIDADEPQEMLDLANYFEDRAI
GVFSECYKNNEERAQKLLVRISHLWGETTCLRLALEANDKNFVAELGVQDLLTQIWCGEL
SVNNPVWRVLVCMVFFPLTYTKFLAFRADENLQREIEQNEWIKMTGEEETESTLNNNSDC
SKKSEEPLGCLSKLKGLYSAPQVKFYGNIVSYFAFLFLFAYVLMIDFQSTPSPLELVLYV
WLFTLVSEEIRQLFYDPDHFGFCEKAKVYIQELWNILDVISIVLFCVGLGLRMTEEFFYP
GKIILCIDFVVFCLRLMAIFTINRTLGPKIIIVKKMMMDLFFFMFLLSIWVVAYGVAKQG
ILIQNEDRLDWILRGAIYEPYLIIFGSFPENIDNAAFDINTCSMGGTDPMKPKCPVLNEN
QMPVFPEWLTIIMLCVYLLCANILLVNLLIAIFNYSFEEVHDNTDRIWKFQRYQLIKEYH
SRPALPPPFIIFNHLYLFTKMVLRKPQELKTEFKVSITKEEEEELLSWEILMRDTYVLSE
QQAKSQSMGGLIQDSSQKVTTLTERLEKLEEQVTNTLQRIEDSLKSLGAPAKETQPQSTV
E
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcccaaggaggaacaaagaaaaacagaagagagaaagaaaaaaagaaaggt
gaatcgatatttttaatggactccccacggccttttgcaacatcacctaactcttcttct
gtgcccaaccaacaagataagatcaatcagcaaatttccacatggatcaagaacaacata
acaaaaaaggaatgctgccctaacaaggattccagcaacaaagacgtatttcgtgaatat
tcggagcttgactccattgataaagccagcaagccagaggacttcaaaaagcaaacctgt
aatgaagaccaacatgtccaagaggtgtcaacagatgcttttggagacatccattttgat
ggtatttggcataagagcagcaagtatgtacgagtattcgcagacaccaaacctgaagtg
ctctacgagttactgacaaaaatatggaaacttccgcctcccaatctggtcatatctgtg
actggaggaggcaataacttctacctgaagtcccacctgacaaaggcttttcacagagga
ctgatcaaagttgctcagactacaggtgcctggatcatcactggcggtacccactctggt
gtgatgatgcatgtgggacaggctgtgagggactgtaccctgagtaacattacgaagcca
aaaatagtggctattggagtggcaccatggggagtaattcacaaaagggataatttaata
aataaagaaggttgcttcccagctcattataagattgacacacaaggtcagggtgacctg
acctgtctcgacgacaatcattcccacctcctgctggttgataatgggatcagtggccga
aatgcctatagtacagagatccagctgcgcacagaactagagaagtacatctcagacaaa
gctcttggacccaaagtgactactaaaaaaaccctggtggtttgtgtggtgttggacgga
ggacaaggtacactagacaccgtctacaatgctattgaaaagggtacaccgtgtgtgatc
ctgcagggctctgggaggatagcagatgttatcgctcatgtgtctgaattcccaaccagt
aagatcaaaccccctctcatcaaggagctggttaagaagttttttggaaaagagagcaaa
accatcaacgatgagaagattaaagcctggacagaaaagatttgtgcgatagtccagaag
cctgatttgctgacaatattcaaagcaaggagtggtgaccagggagttttggatgtggca
atccttgatgctcttctaaaagctttcaagactgctacatcggaagaagatttgtgctgg
aagaagcagctggacctggctatcagttggaacagagtcgattcagctgaaactaagatt
ttcacagaggaaacgatttggaagtccagtgagctccaccagttcatgcggttagccctt
gttggcaataagcctgattttgtgagtctgctcctggaaaacggtgtgtgtctggaggac
tttctggatgagaacaccctttgtcagctctacaaaaacttgcccaactgcctttttttg
tacaagctgttcaagatggagaaatttaccaaaaccagcagcaggaagaaggcactgaac
atgaagagtcttgatgaagcacgaaaaaatatcaccctgactaatgtctctattgaagtg
cgccacctgctgggtaaatttacaaagtacatctatccattgtccaaggtcggagaacat
actgtgcagatagataaggacgatgaatctaagagggatgcagccagagatcttttcctt
tgggcagttgtccagaacaacaaggagctgtctataatcgcctgggatcagtgtagagac
tgcatctctgctgctctggctgccagtaagatcctgaagaaaatggcaaaggagtcaatc
gatgcagacgagcctcaggaaatgctggatctcgccaattactttgaagatcgtgcaatt
ggtgtgttcagcgagtgctacaagaataatgaggagcgtgcccagaagctgctggttcga
atctcacacctttggggcgagacgacgtgtctgaggctggcactggaggccaatgataaa
aactttgtggctgagttaggtgttcaggatcttcttactcagatctggtgtggtgagctt
tcagtcaacaatcctgtgtggagggtgctggtctgtatggtcttcttccctctgacctac
accaagtttctggctttcagagctgatgaaaacctgcagagagaaatcgagcagaacgag
tggataaaaatgactggggaggaagagacagaaagcactttgaacaataactcagattgc
tctaagaagagtgaggagcctctgggctgcttgtccaaactgaaaggactctacagcgct
cctcaagtcaagttttatggaaacatcgtctcgtactttgccttcctgttcctgtttgct
tatgtcctgatgatcgacttccagagtacaccatctccattagagttggtgctctacgtc
tggttgttcactctggtgtctgaggagataagacagctgttttatgatcctgatcatttt
gggttttgtgagaaagccaaagtgtacattcaagagctgtggaacattttggatgtcatc
tccattgtgctgttctgtgtaggacttggattgaggatgacagaagagtttttctaccca
ggtaaaatcatcctgtgcatcgactttgtggtcttctgtctccgcctcatggcaatcttc
acaatcaatcgcaccttgggacctaaaatcatcatagttaagaagatgatgatggatctg
ttcttcttcatgttcctcctgagcatctgggtcgtggcgtacggtgtggccaaacaaggc
atcctcatccaaaatgaagatcgactggactggatcctccgtggggctatttacgagccg
tacctcattatatttggaagtttccctgaaaatattgacaatgctgcatttgatataaat
acatgcagtatgggtggtacagatcccatgaagcccaagtgccctgtgctgaatgaaaac
caaatgccagtcttccctgagtggctcaccatcatcatgctctgtgtttacttgctctgt
gccaacatattgctcgtcaacctcctcatagccatctttaactactcatttgaggaggtc
catgacaacacggacagaatctggaagtttcaaagatatcagctgatcaaagagtaccac
agccgcccggccctcccacctcctttcatcatcttcaatcatctctacctcttcactaaa
atggtgctgcggaaacctcaggaattaaagactgaattcaaggtttctatcacaaaagag
gaagaggaggagctgttgtcctgggagatcttgatgagggacacatatgtgctatctgaa
cagcaggcgaagagccagagcatgggggggctcatccaggattcatcccaaaaggttacc
accttaactgaacggctggagaaactagaagaacaggtcaccaacacactgcagaggatt
gaggacagtctgaaatctctgggtgctcctgcaaaagaaactcaaccacagagtactgtt
gagtga
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integrated database retrieval system
