Gambusia affinis (western mosquitofish): 122844409
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Entry
122844409 CDS
T07758
Symbol
trpc6a
Name
(RefSeq) short transient receptor potential channel 6a isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122844409 (trpc6a)
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122844409 (trpc6a)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank_4
Ank
YVC1_C
DUF6744
Motif
Other DBs
NCBI-GeneID:
122844409
NCBI-ProteinID:
XP_043995734
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Position
LG15:9400123..9412088
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AA seq
885 aa
AA seq
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MNHRPPPPPLAGHISRAAGDNDRSRARSRDNLLLYDDFGEEYCCAGQCLGRHSSADRLLT
AHLSAAKRRQAMRGPAYMFSAPSFSLSEVEQRFLEAAEYGNIPEVRRMLLHIPSLNVNAV
DYMGQNALQLAVANEHLEVTELLLGRADLARVGDALLLAISKGYVRITEALLSHPSFRDA
HRLTASPAQVDMLDDFYAYDEDGTRFSHDVTPVILAAHCQEYEIVHTLLSKGARIDPPHD
YFCGCDSCNYQQQYDSFSHSRSRINAYRGLASPAYLSLSSEDPVLAALELSSELAMLADI
EKEFKNDYSRLSNQCKDYVVGLLDLCRSTEEVEAILNGETVSDDSFDMPGRPSLTRLKLA
IKYELKKFVAHPNCQQQLLSIWYENLPGLRQQTTAVKLLVVLAVAIGLPGLAVAYWVTPC
SRVGKVMRSPFMKFVAHASSFTIFLGLLILNAADRFAGTTLLPNMTHHQQPGSPQFKLDP
LLLHRKTTTPFTWMEILIISWVMGMIWAEVKEIWSQGPGEYLVEPWNFLDFGMLAIFLAS
FSCRFSAMKQADLAQAYVYKHCKTLVQLPPEIHYFTLARIYWTPSDPQLVSEGLYAIAVV
LSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFLLVFLAFMIGMFNLYSYYLGAKQ
NDAFTTLEESFKTLFWAIFGLSEVKSVVINNGHKFIENIGYVLYGVYNVTMVIVLLNMLI
AMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSVLGLAKAIKSML
LYVAHRHREKKTETQLNQLGESKNPGYGGSNGPTRYEKIMKRLIKRYIIKAQADRESDEI
TEGELKEIKQDISSLRYELLEEKSQNMETLDGLLRRLGEFSMPSS
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacagaccgccgccgccgccgctggccggccacatcagccgggctgccggcgac
aatgacagatccagagcgaggagccgcgacaacctgctcctatatgatgactttggagag
gaatactgctgtgctgggcaatgccttggcaggcacagcagcgctgacaggttgctcaca
gctcacctcagcgctgctaaacgccgccaggctatgcgaggtcctgcctacatgttctca
gctccttccttcagcctgtcagaggtcgagcagcgtttcctggaggcggctgagtacggc
aacatcccagaggtgcggcgcatgctgctccacatccccagcctgaacgtcaatgcagtg
gactacatgggacagaacgcgctgcagcttgctgtggccaacgaacatctggaggtgacg
gagctgctgctggggagggcagatctggccagagtgggagatgctctcctactagccatc
agtaagggatatgtccgtatcacagaggctctgctcagtcacccttcctttagagacgct
caccgtctgacagcaagcccggctcaagtagacatgttggacgacttctatgcttatgac
gaagatgggacaaggttttctcatgatgtgactccagtgatacttgcagcccactgccag
gaatatgagatagttcacacgctcctgagcaaaggcgcccgcatcgacccgcctcacgac
tacttctgtggctgcgactcgtgtaattatcagcagcagtacgattccttcagccactcg
cgctccaggatcaatgcctacagaggcctggccagtcctgcatacctctccctgtccagt
gaggacccggtcctggctgccttggagctcagcagtgagctggccatgctggctgacatt
gagaaggagtttaagaacgattacagtcgcctgtcaaaccagtgtaaggattatgtggtg
ggccttctggatctttgtcgcagcacagaggaagtggaggccatcttgaatggagaaacg
gtttctgacgacagcttcgacatgccaggtcgtccctccctcacacgcctcaaattagcc
atcaaatacgaactcaaaaagttcgttgctcatccaaactgccagcagcagctgctgagt
atttggtacgagaacctgcccggcctgagacaacaaaccactgctgtgaagctgctggtg
gtgctggctgtggctataggactccctggactggctgtggcttactgggtcactccgtgc
agcagagtgggaaaagttatgcgcagccccttcatgaagtttgtcgcccacgcctcgtcc
ttcaccatcttcctgggcctgctcatcctgaacgcagcggaccgctttgcaggcaccacg
ctgttgccaaacatgacccaccatcagcaacctggaagtccacaattcaagctggacccc
ctgctgcttcaccgcaagaccaccacccccttcacctggatggagatcctaatcatttca
tgggtcatgggcatgatttgggctgaagtgaaggagatctggagtcagggacctggagag
tacctggtggaaccgtggaacttcctggactttgggatgctggccatttttctggcctcg
ttcagctgccgcttctctgcaatgaagcaagctgacctggctcaggcctatgtgtacaaa
cactgcaaaactctggtccaacttcccccagagatacactacttcactctggctcgtatc
tactggacgccgtcggaccctcagctcgtgtcggagggtctttatgcgatcgcagtcgtg
ctgagcttctctcgaattgcttacatcctgccagccaacgagagctttgggccgctccag
atctctttaggaagaaccgtcaaagacatcttcaagttcatggtcatcttcctgctcgtc
tttctggcgttcatgattggcatgttcaacctgtactcttactacctgggagcgaagcag
aatgacgccttcaccaccctggaggagagcttcaagacgctgttctgggctatatttgga
ctctctgaggtcaaatccgtagtcatcaacaatggacacaagttcattgagaacattggc
tacgtactgtatggcgtttacaacgttaccatggtgatagtgctgctcaacatgctcatc
gccatgattaacagctccttccaggagatagaggatgatgccgatgtcgagtggaagttt
gctcgggcgaaactttggttttcttactttgaagagggaaggacgctccctgtcccattc
aatctggtccccagtccaaagtctgtgctgggactggccaaagccataaagtccatgctc
ttgtatgtggctcacagacacagggagaagaaaactgagacacaacttaatcagcttggg
gagagcaaaaatccaggttatggcggttcaaatggtccaacaagatatgagaagatcatg
aagcgactaatcaagcgttatataatcaaagctcaagcagacagagagagcgacgagatc
acagaaggtgagctgaaagagatcaaacaggacatctcgagcctgcgatatgagctgctg
gaggagaaatcccagaacatggagacgcttgacggactgttgaggaggctgggagagttc
agcatgccatcatcttag
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