Gambusia affinis (western mosquitofish): 122845251
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Entry
122845251 CDS
T07758
Symbol
smpd1
Name
(RefSeq) sphingomyelin phosphodiesterase
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf00600
Sphingolipid metabolism
gaf01100
Metabolic pathways
gaf04142
Lysosome
gaf04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
122845251 (smpd1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122845251 (smpd1)
09143 Cell growth and death
04217 Necroptosis
122845251 (smpd1)
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
122845251 (smpd1)
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Motif
Pfam:
Metallophos
ASMase_C
SapB_1
Motif
Other DBs
NCBI-GeneID:
122845251
NCBI-ProteinID:
XP_043997375
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Position
LG15:complement(19869174..19876379)
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AA seq
602 aa
AA seq
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MRLPTLRPFLGLTTCTLLLMSPLFGSCHPAQYQAQTRTVLVELFETHGLGFAWRNLTCPF
CKAIFTILDIALLSSANEERVAHAVSEACIRLHLADEQVCRNITELFRDDFIRALQQSVL
WPTEACAVLVGPSCGTFDIYAPWNITLPKVPKPPVTPPSPPKPGSPQTRVLFLTDIHWDK
EYETGSAADCKEPLCCRTDSGVPKWKRRRAGYWGTYSKCDLPLRTVANLLENAAKAGPWD
WVYWTGDIPAHNVWSQTRNQQLTELTVISKLIHKYLGANVTVYPAVGNHESTPVNSFPPP
FVHGNRSSAWLYDKMAEEWAQWLPEQALKTLRYGGFYTLEIQPGLRVVSLNMNFCARENF
WLMVNSTDPANQLQWLVQVLQASEDRGEKVHIIGHIPPGLCLGSWSWNYYHIVNRYESTI
TGQFFGHTHLDEFQMFYDEETMTRPLGVAFIAPSATTFVNLNPGYRIYYVDGNYKNSSRL
VLDHETYILNLTEANHDLKSPDNPEQNPKWSLLYRATEAYGLSSLFPSDYNTLLRTFIND
DRTFQKFWYLRHKGHVSESCKEACKTTMLCFLRSGRSDELDECDHLNGFAGNLARAARKT
LC
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaggctccccacactgcgccccttcctgggactgacgacctgtactttgctccttatg
tcgccgctgttcgggtcctgtcatccagctcagtatcaagctcagaccaggaccgtgttg
gtggagctgttcgaaacccacggactcggcttcgcctggagaaacctcacctgtcccttt
tgcaaagcgatcttcaccattcttgacatcgcacttctgagcagtgcaaacgaagagcgg
gtggcacatgcagtcagcgaagcatgcatccgtttacatctggctgatgagcaggtgtgc
cgcaacataactgagctgttcagggacgacttcatcagggccttgcagcagtctgtgctg
tggcccaccgaagcatgtgcggtattggtggggccttcgtgtggcacatttgacatttac
gcaccgtggaacatcactttgccaaaggttcccaagccccctgttacgccaccctcaccg
cctaaacctggctctccacagactagggtgctgtttctcacagatatccactgggacaag
gaatatgaaactggcagcgctgccgactgcaaggagcctctctgctgtcgcacagactca
ggtgttcccaaatggaagcggagaagggctggctactggggaacctacagcaagtgtgac
cttcctctacgcaccgtggcgaacctcctggaaaatgctgctaaagccggaccttgggac
tgggtctactggactggagacataccagcacacaatgtctggtctcagaccagaaaccag
cagctgacagagctgacagtaatctccaaactcatccacaagtacctgggagccaatgtg
actgtttatcctgcagtaggaaaccatgagagtacaccagtgaacagcttcccgccaccg
ttcgtccacggcaaccgatcctctgcctggctctatgataaaatggcagaggaatgggcg
cagtggttgccagagcaggcgttgaagactttaagatatggagggttctacacactagag
attcagcccgggctgagggtggtctccctcaacatgaacttctgcgcacgagaaaacttc
tggctgatggtgaactccactgaccctgctaaccagctgcagtggctggttcaagttctg
caggccagtgaggacagaggagagaaggtgcatattattggtcatattccacctggcctg
tgtcttggcagctggagctggaactactatcacatcgtcaacagatatgaaagtacaatt
actgggcagttttttggacatacccatctggacgagtttcaaatgttttacgatgaggaa
accatgacccggcctttaggagtggctttcattgcccctagtgccaccacttttgtcaat
cttaatccaggttaccgcatctattatgtcgatggaaattacaaaaacagctctcgtctt
gtgcttgaccatgaaacctacatcctcaacctcacagaggcaaatcacgacctaaagtca
ccagacaatccagagcagaaccccaaatggagccttctgtaccgggccactgaagcttat
ggtctttccagtctgttcccgtctgattacaacacgctgctgcgaacctttatcaacgac
gaccgcaccttccagaagttctggtacctcagacataaaggacatgtgtcagagtcctgc
aaagaggcatgcaaaaccacaatgctctgctttttgcgaagcggacgctctgacgagctg
gacgagtgtgaccatctcaatggttttgctggaaatttggctcgggctgcaagaaaaact
ctttgttga
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