Gambusia affinis (western mosquitofish): 122846003
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Entry
122846003 CDS
T07758
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122846003 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122846003 (c9orf72)
Membrane trafficking [BR:
gaf04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
122846003 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
122846003
NCBI-ProteinID:
XP_043998576
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All DBs
Position
LG16:complement(23320844..23327701)
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AA seq
462 aa
AA seq
DB search
MSSGCPPQSPAVAKTEVAVEGECPLLAATFAYWDNILGPRVRHMWAPRGEQPMSLSDGEV
TFLANHTLNGEILRNAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSVILPQT
ELAFYLPLHAVCVERLTHGIRKGRIWMQKGYNIISVLSLEIAPIMELLASMKSHCVPEEI
DIRDTVLNDDDIGDSCHEGFLHKAISSHLQTCGCSVVVGSNPEKVNKIVRTLCLFLTPAE
RKCSRLCRASSSFKYDTGLFVQGLLKDSTGSFVLPFRQVLYAPYPTTHIDVDINTVKQMP
PCHEHTFNQRRYMRSELNALWKTDSEDDIPPETVIHTDETFTPDLNIFQDVLHTDTLVRS
FIDEVFLLKPGLALRSAYLAQFLLLLHRKALTLLKYIEDETQKGKKPFRALRNLKADLDL
KAEGDLNIVMAMAEKLRAGLHSFVFGKPFYTSMQERDVLMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccggctgtcccccccagtccccggccgtagcgaagacagaggtagcggtggag
ggagagtgccccctgctggccgccaccttcgcctactgggacaacatcctggggcctcgc
gtgcgccacatgtgggcgccgcgaggcgagcagccgatgtcgctgagcgacggcgaggtc
actttcctggccaaccacacgctgaacggagagatcttgcgcaacgccgagtgcggcgcc
gtggacgtcaagttcttcgtcctggcagagaaaggtgtcatcatcgtgtctctgatcttc
gatggcgagctgaagggcgacaagaacacgtgcgccctgtccgtcatcctgccgcagacc
gagctggccttctacctgccgctgcacgccgtctgcgtggagcggctcacacacggcatc
cgcaagggacgcatctggatgcagaagggctacaacatcatctcagtgctgagcctagag
atcgcccccatcatggagctgctggcctccatgaagtctcactgcgtgcctgaggaaata
gacattagagacaccgtgctaaatgatgacgacatcggggacagctgccatgagggcttc
ctccacaaagccatcagctcacatctgcagacgtgcggctgctccgtcgtggtcggaagc
aacccagagaaagtaaacaagatcgtccggacgctctgcctgttcctgactccagctgag
aggaaatgttcccgcctctgccgggccagctcctccttcaagtacgacacgggtctgttt
gtccagggactcctgaaggactccacgggcagctttgtgctgccgttccgccaggtgctg
tacgcgccgtacccgaccacgcacatcgacgtggacatcaacaccgtgaagcagatgcca
ccgtgccatgaacacaccttcaaccagcggcgctacatgcgctctgagctcaacgcgctg
tggaagaccgacagcgaggatgacatcccgccggaaactgtgatccacacggatgaaacc
ttcacccctgacctgaacatcttccaggatgtcctgcataccgacacgttggtcagatcc
ttcatagacgaggtgttcctgctgaagcccggcctggccctcaggagcgcctacctggcc
cagttcctgctgctgctgcaccgcaaggcgctcacgctgctcaagtacatcgaggacgag
acgcagaaagggaagaagccgttccgggccctccggaacctgaaggctgacctggacctg
aaggccgagggagacctgaacatcgtcatggcgatggccgagaagctgagggcggggctt
cactcctttgttttcgggaagccgttctacaccagcatgcaggagagggacgtgctcatg
agcttctga
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