Gambusia affinis (western mosquitofish): 122846061
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Entry
122846061 CDS
T07758
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04620
Toll-like receptor signaling pathway
gaf04621
NOD-like receptor signaling pathway
gaf04622
RIG-I-like receptor signaling pathway
gaf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
122846061 (traf3)
04621 NOD-like receptor signaling pathway
122846061 (traf3)
04622 RIG-I-like receptor signaling pathway
122846061 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122846061 (traf3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
zf-RING_4
FapA
GAS
Leu_zip
ATG16
DUF4201
zf-TRAF_2
zf-RING_UBOX
zf-C3HC4_4
TolA_bind_tri
Sina_ZnF
HOOK
Fez1
zf-RING_2
Prefoldin_2
zf-RING_6
TMF_DNA_bd
Lectin_N
Snapin_Pallidin
EzrA
DUF3450
DivIC
CCDC138_cc
Mis12
Crescentin
DASH_Dad2
KxDL
BLOC1_2
LURAP
DUF1664
SHE3
Knl1_RWD_C
Fzo_mitofusin
UPF0242
Motif
Other DBs
NCBI-GeneID:
122846061
NCBI-ProteinID:
XP_043998670
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Position
LG16:complement(2598693..2613659)
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AA seq
590 aa
AA seq
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MSSGRSANGREVQIPLQQVAPSLVAPLPITPPSHRSTNPWPPCDLAPQPSAPAGFQPLHG
GFRDVFVEKPEAKYCCEACRRVLCEPRQTECGHRFCQSCINDILSHSNPVCPADREPLFK
DKIFRDVCCHREIMALKVFCRSKANGCQEQMSLQQIPDHLNVCPFFEVPCPLGKCKERMM
RKEIPEHLAWKCKHRESTCEFCMTKMPLTDLQKHKETVCPSFPVSCPNHCSFSSLPRSEL
TSHQHDCPKAQVSCLFHRYGCTFKGLNQEMRQHDSTFVAEHLRMMVKGNCLLENKVDNVK
EELMERCKVLPALNSRLSELESQNEELREKNRQMEQKLANLQKMMSSHSETLMALEIELG
SLRRLREEVETLRGTMDNVRTRLATLEQGGRSGSGSTHTFASLETQLNRHDDMLSVHEIR
LADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVAGKTLSLYSQPFYTGYFGYKMCARV
YLNGDGMGKGTHLSLFFVVMKGEYDALLPWPFKQKVTLMLMDQTPSRKHLGDAFKPDPHS
SSFRRPTAEMNIASGCPLFVAQSVLETGSYIKDDTIFIKVTVDTSDLPDP
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagggagaagtgctaatgggagggaagtacagatacccctccagcaggtggcg
ccttcacttgttgctccccttccaatcacaccaccctcccaccgctcaaccaatccctgg
cctccatgcgatctcgctcctcaaccaagtgctcctgcagggttccagcctcttcatgga
gggtttcgagatgtgttcgttgagaagccagaggccaaatactgctgcgaggcgtgcagg
cgggtcctgtgtgagccccgccagactgagtgtggacaccgcttctgtcagagctgcatc
aatgacatcctcagtcattcaaacccagtgtgtccagctgacagggagcccctgttcaaa
gacaagatctttagagacgtatgttgccatcgagagattatggcgctgaaggtcttctgt
cggagtaaagctaacggctgtcaggagcaaatgagtctgcagcagatacctgaccacctg
aatgtgtgtccgttcttcgaggtcccctgtccgctggggaaatgtaaagagaggatgatg
aggaaggagattcctgagcacctagcgtggaaatgtaaacacagagagagcacttgtgaa
ttttgcatgaccaagatgcctttgactgacctacagaaacacaaggagactgtgtgtcca
tcgttccctgtgtcctgtcccaaccactgctccttctcttccctgccccggagtgagctg
accagccaccagcacgactgtcccaaagcccaggtcagctgtctgttccaccgctacggc
tgcaccttcaagggcttaaatcaagaaatgaggcagcatgactcgaccttcgtagccgag
catctaagaatgatggtcaaagggaactgcttgttggagaacaaggtggacaacgtgaag
gaagagctgatggagcggtgcaaggtgcttcccgctctcaacagccgactgtcggagctg
gagagccagaatgaagagctgcgggaaaagaaccggcagatggagcagaagctggccaac
ctgcagaaaatgatgagctcacattcagagacgctgatggcgttggagatagagctgggt
tcactgcgtcgactaagagaagaagtggaaaccttacgaggaacgatggacaacgttcgg
actcggctggccaccttggagcaggggggacggagcggctctggatccactcacaccttc
gcgtccttggaaactcagctcaatcggcacgacgacatgctgagcgtccatgaaatccgg
ttggctgacatggacctgaggttccaggtactggagacggctagctacaatgggactcta
atctggaaaatccgggactacaagagacggaaacaggaagccgtggcaggaaagacgctg
tcactgtactcacagccgttttataccggatatttcggatacaagatgtgcgctcgggtt
tacctaaatggagacggcatgggcaaggggacgcacctgtcgctgttctttgtggtgatg
aagggcgagtacgacgccctgctgccctggcccttcaagcagaaggtgactctgatgctg
atggaccagactccttccaggaagcacctgggcgacgccttcaagcccgacccgcacagc
agcagcttcaggcgccccacggccgagatgaacatcgcctccggctgccctctgttcgtg
gctcagagcgtcctggagacgggcagctacatcaaagatgacaccatcttcatcaaggtc
accgtggatacgtccgaccttcctgacccatga
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