KEGG   Gambusia affinis (western mosquitofish): 122847192
Entry
122847192         CDS       T07758                                 
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    122847192
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gaf03000]
    122847192
   04121 Ubiquitin system [BR:gaf04121]
    122847192
   03036 Chromosome and associated proteins [BR:gaf03036]
    122847192
Enzymes [BR:gaf01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     122847192
Transcription factors [BR:gaf03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    122847192
Ubiquitin system [BR:gaf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     122847192
Chromosome and associated proteins [BR:gaf03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    122847192
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     122847192
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD F-box Cupin_8 JmjC LRR_4
Other DBs
NCBI-GeneID: 122847192
NCBI-ProteinID: XP_044000584
LinkDB
Position
LG17:13979346..14000577
AA seq 1390 aa
MAQSVETCAETGRRLRSICRRMYDENEDLSDVEEIVNIRGFSVEEKLASDCYNSEFVHLM
EGRDFTYEYVQKEALRIPLIFKEKDELGIRMPDSEFTVSEIKGLVGSRRSVDVMDVSTQK
GSEMSMAQFVRYYETPEEERDKLFNVISLEFSHTKLEHLIKRPTVVDQVDWVDNMWPPDL
KHSQTEATNIISEMKYPKVQRYCLMSVKGCYTDFHIDFGGTSVWYHVFKGQKVFWLVPPT
PHNLALYEDWVLSGKQSDVFLGDRADGCQRVELKQGYTFFIPSGWIHAVYTPVDTLVFGG
NILHSFNIPMQFTIHEIENRTKVHSKFRFPFYYEICWYVLERYLHCLTKRSYYTHEIHKE
SVDFETKIKTESPSSDSRSQDMNEDSCGPLVRDGHREKTERPSGDGPCSPDIIKGSLLRA
ALSVDSEDSCNPCSASPDFSKTPSESPGSEAQSKRTHLTQHELIGLRTLVEKLESLPENK
KCVPVGIESPQALLDDMKVVLKEHADDDPKLAITGVPVVLWPKKVLKPRPPNRPKPKMAA
SPASAVKLSASRGTSGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCIMR
QCIAPVLPHTAVCLVCGEAGKEDTVEDEEEKFNLMLMECSICNEIVHPNCLKVKDSSGLV
NDELPNCWECPKCNHAGKTGKATKQKRGPGFKYASNLPGSLLKEPRLNRDSKEEPEPLPP
PLLPVVMATTPVTPLTTSSAVKRKAEREVILKKNDDEPPKKRPPLLALESLPRTRLEDNP
LRKKRKLFDTNDEPIMLKKKKKLLKADDQFSLKPLQQIKTENDHREEDEGHWDHEEDILS
SDRMHFKRKSQYDDEGQDEDSEEEEAAGKERDDKTKALVSPLLRTSSAREGDHSSSNSPR
AGPSSESGDGQEKSSGPLKARHQRRRLPNKGPSKELSQEVLKTEDSLSNQKHSVEKMENN
GHYRKPFKNEDFIANQNCKPIKTEEAQNRSCPKLEDSVANYHKQPLKTEDCSGNQNHSPV
KPEPGSEADEQKPSWPLSNGSSDLGDWLRHRGQEVNGMPHVYSPLSWNRSALITPICPRP
LPRRSPPKCVQMERHVIRPPPISPPPDRLPLNDGEAHVMRREAWMKVFSHLPHRDLCVCM
RVCRAWNRWCCDKTLWKQISLNRCKSITPLMLSGIIRRQPVALDLSWTNISKKQLSWLIN
RLPGLRVLLLSGCSWVAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQL
DNRSKLRNVEELRLAGLDITDTSLCLIIRYMPLLSKLDLSYCNHVTDQSVNILTAAGTTT
RDSLTDINLSVCNRVTDQSLTYFKRCGSICHIDLRYCKQVTKEGCDQFIAEMSVSVQFEL
IEDKLLQKIS
NT seq 4173 nt   +upstreamnt  +downstreamnt
atggcccagtccgtggagacgtgtgctgaaactggacggaggctgcgctccatctgccgg
aggatgtacgacgagaacgaggatctatctgacgttgaagaaattgtaaacattagaggt
ttcagcgtggaggaaaagcttgccagtgactgctataattcagaatttgttcacttaatg
gagggcagagacttcacctatgaatatgtgcaaaaggaggccctcaggataccacttatt
tttaaagagaaagatgaattagggatcagaatgcctgactcggagtttacagtcagtgaa
ataaaaggattagttggcagtcgcaggtctgtggatgtcatggacgtgagcactcaaaaa
ggctcggaaatgagcatggctcagtttgtccgttattacgagaccccggaggaagagcgc
gacaaactctttaatgtgatcagcttagagttcagccacactaagctggagcatctcatc
aaacggcccacagtggtggatcaggttgactgggtggacaacatgtggcctcctgatcta
aagcacagccaaacagaagctaccaacattatttcagagatgaagtaccccaaagtgcaa
aggtactgtttgatgagtgtaaagggctgctacacagactttcacattgatttcggagga
acgtcagtttggtatcatgtattcaagggacaaaaagtattctggcttgtgcctccaacc
ccacataaccttgcactgtatgaggactgggtcctttcaggcaagcagagtgacgtcttc
ctgggagaccgagctgatggatgccagagagtggagctgaaacaaggatacaccttcttc
atcccatctggttggatccatgctgtttacactcctgtagacacactagtttttggagga
aacattctgcacagctttaacatccccatgcagttcactatccacgagatagaaaacagg
acaaaggttcattccaaattccgcttcccattttactacgagatttgctggtacgtcctg
gagcgatacctgcactgtctgaccaaaaggtcctactatactcatgagatccataaagag
tctgtcgactttgagacaaagataaaaacagaaagcccgtcttcggactccaggagccag
gacatgaatgaggactcctgtggacctctggttagggacggccacagagaaaaaactgaa
agaccctctggagatggcccttgctcgcctgacatcatcaagggctcactgctcagagct
gctttatctgtcgactcggaggacagctgtaatccttgctccgcctctccagacttctcc
aaaaccccctcggaatctccaggttctgaggctcagagcaagaggactcacctgacacag
catgagctgatcgggctcaggacactggtggagaaactggaatcactccctgagaataaa
aaatgtgttccggtgggaatagagagccctcaggccctcctagatgacatgaaggttgtc
ctgaaggaacatgccgatgatgacccaaaattagcaatcaccggggttcctgttgtgtta
tggcctaagaaagtcttaaagccccggcctcccaaccggccgaaacctaagatggcagca
tctcctgcatcagcagtcaagctgtcggccagccggggaacgtctggtgccaggagaaga
aggacgcgttgccgaaagtgcgaggcgtgtctgcggacggagtgcggagaatgccacttc
tgtaaagacatgaagaagtttggagggccggggcgaatgaagcagtcttgcatcatgagg
cagtgcattgctccggtcctgccccacacagcagtgtgtcttgtctgtggagaagctgga
aaggaagacacagtggaggatgaagaggagaaattcaacctgatgctcatggagtgctcc
atctgtaatgagattgttcatccgaactgtctcaaggttaaagattcgagtggattagtc
aatgatgagctgccgaactgttgggagtgtccaaagtgtaaccatgcaggaaaaactgga
aaagccacaaagcaaaaaagggggccaggattcaagtacgcatcgaaccttcctggctcc
cttctcaaagaaccgcgcttaaaccgagactcaaaagaggagcccgagccgctgcccccg
ccgctgctgccggtggtgatggcaacgacacctgttaccccactgacgacctcgtccgct
gtgaaaaggaaagcggagcgggaagtaatcttgaagaagaacgatgacgagcctcctaag
aaacgtccgcccctgctagctctggaaagcttaccacgaacacgactcgaagataatcca
ttgaggaagaaaaggaaactgtttgatacgaatgatgaacccattatgttgaaaaagaag
aaaaagcttttaaaagcagatgatcaatttagtctgaagcctttgcaacaaatcaagaca
gagaacgatcacagggaggaagatgagggacactgggatcatgaagaagatattttatcc
tcagaccgaatgcattttaagaggaagagccagtatgacgatgagggccaagatgaggat
tcagaggaagaggaggctgcaggtaaagagagagatgataaaaccaaggcactcgtgagt
cccctgctaagaacatcctcagccagagaaggtgaccactcatcctccaactctcccaga
gccggaccgagcagcgagtcaggagatggccaggagaagagctctggtccactcaaagcc
cgtcatcagcgccgacgtcttccaaacaaaggaccgagcaaagagttgagccaagaggtc
ctcaagacggaggattctctgagcaaccagaagcacagcgtggagaagatggagaacaac
ggtcattatcgcaagccattcaaaaacgaagattttatagccaatcagaactgcaaacct
ataaaaactgaagaggctcagaatcgtagctgtcctaagctggaggacagtgtggccaac
taccacaaacagccgctgaaaaccgaggactgctcgggtaaccagaatcacagcccagta
aaacctgaaccagggagcgaagcggatgagcagaaaccaagctggccgctcagcaacggc
agcagtgacctgggtgactggctgcgacacaggggtcaggaggtcaatgggatgccacac
gtttactctcctcttagctggaacagaagcgcgctgattacaccgatatgtccgcgtccg
ctcccccgccggtcgcctccgaagtgcgttcaaatggagcgccacgtcattcgaccccct
cccatcagtcccccacctgacagactgccgctgaacgacggggaagcccacgtgatgcgt
cgggaggcgtggatgaaagtgttcagtcacctccctcacagggatctctgcgtctgcatg
cgtgtctgcagagcgtggaacagatggtgctgcgataaaaccctgtggaagcaaatcagc
ctgaaccgctgcaagtcgataacgcctctgatgctgagcggcatcatccggaggcagccg
gtagccctggacctcagctggaccaacatctccaaaaaacagctcagctggctcatcaac
aggcttcctggtttgcgcgtgttgctcctgtctggttgctcttgggtcgccgtctcggcc
ctgtgcacctccagctgtcctctgctgcgaacgctggacgttcagtgggtcgagggcctg
aaagacgcccagatgagagacttactgtcgcccccgacagataacaggccaggtcagctg
gataaccggagtaagctgcgtaacgtggaggagctccggctggctggactggacatcacc
gacacgtctctgtgcctcatcatccgttacatgcctctgttatcgaagctggacctcagc
tactgcaaccatgtcaccgaccagtctgtgaacatcctgaccgctgcagggacaaccacc
agagactcgctcactgacatcaacctgtcagtctgtaacagggtcaccgaccagtcgctg
acctatttcaagcgctgtggaagcatctgtcacatcgacttgcgctactgcaagcaggtg
accaaggaggggtgtgaccagttcatcgccgagatgtcagtcagcgttcagtttgagcta
atagaggacaaactgctgcagaagatcagctag

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