Glaciecola sp. 4H-3-7+YE-5: Glaag_3372
Help
Entry
Glaag_3372 CDS
T01483
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Pathway
gag01501
beta-Lactam resistance
gag01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Glaag_3372
01503 Cationic antimicrobial peptide (CAMP) resistance
Glaag_3372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gag03036
]
Glaag_3372
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gag02000
]
Glaag_3372
01504 Antimicrobial resistance genes [BR:
gag01504
]
Glaag_3372
Chromosome and associated proteins [BR:
gag03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Glaag_3372
Transporters [BR:
gag02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Glaag_3372
Antimicrobial resistance genes [BR:
gag01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Glaag_3372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
Beta-barrel_RND
CzcB_C
RND-MFP_C
BSH_CzcB
BSH_RND
HH_MFP_RND
Beta-barrel_YknX
BSH_CusB
CSD2
Biotin_lipoyl
HH_EMRA
BSH_LcnD
DUF5804
AgrB
Motif
Other DBs
NCBI-ProteinID:
AEE24306
LinkDB
All DBs
Position
complement(3946802..3947866)
Genome browser
AA seq
354 aa
AA seq
DB search
MPKGISFSPILIALILASGLLIYLYLPVDTEQQQKKSIATPVTAYTVSEVKFPVVVEALG
TANANESVMLTAQKSDIVQSIEFDDGDLVEKGQLLIKLSDREERARLNELDINLQEAKRQ
LKRIDNLAQKSVASKQLLDEQEANVKALKAQLEVAKAQLEELELRAPFSGLLGVRQVSLG
ALVMPGDLIATLDDLHIIKMDFTIAESHLPSVRKGQQVSATSAAYPGETFEGEISSIASR
VDPVTRAIQIRAIIDNKDLKLRPGMLLQINLEKDILNTLTLPEGALVPIEDKQFVFVIKG
DKVERQEVKVGLRKPGIAQITSGLKEGDQVVIEGALRLREGSVVNVLSTHTSQG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaggaatttcattttcacctattttaattgcactgattttggccagtggctta
ttgatatatttatatctgccagttgatacagagcaacagcagaaaaaatcaattgcgacg
ccagtgactgcatatactgtgtcagaagtgaaatttcctgtcgtggttgaagccttaggt
acagctaatgcgaacgaatccgttatgctaacggcgcaaaaatcagacattgtgcagagc
atagagtttgacgatggagacttagtcgaaaaaggacaattgttaattaaactgagtgat
cgcgaagagcgggctcggttgaatgagttagatatcaatttacaagaagcaaaacgtcag
ctaaagcgaattgacaacttggcgcaaaaaagcgttgcttcaaaacagttattagatgaa
caagaagccaatgtaaaagcattgaaagcccagctagaagttgcaaaagcgcagttggaa
gagctagaacttcgcgcacctttcagcggtttactaggcgttcgtcaagtgagcttgggg
gcgcttgtgatgccaggtgacttgatagccacgctagatgatttacacataattaaaatg
gacttcactatagctgagtcacatttgcctagtgtacgcaaaggacagcaagtgtctgct
acgtcagctgcttaccctggcgaaacctttgagggggaaatatcaagcattgcttctcga
gtcgaccctgttacccgcgcaatccaaattcgcgccatcatcgataacaaagatctcaaa
ctgcgccctggcatgttacttcaaattaaccttgagaaagacattctcaatacgttgacg
ttaccagagggagcattggtgccgattgaagataagcagttcgtattcgtgatcaagggc
gacaaagttgagcgtcaagaggtaaaagttggtttacgtaaacctggtattgcacaaatt
acttctggcttaaaagaaggcgatcaagtggtgattgaaggtgcacttcggttacgagaa
ggatcggttgttaacgtgttatccacgcatacatcgcaaggataa
DBGET
integrated database retrieval system
