Granulosicoccus antarcticus: IMCC3135_22520
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Entry
IMCC3135_22520 CDS
T04938
Symbol
capD
Name
(GenBank) UDP-glucose 4-epimerase
KO
K15894
UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:
4.2.1.115
5.1.3.-]
Organism
gai
Granulosicoccus antarcticus
Pathway
gai00541
Biosynthesis of various nucleotide sugars
gai01100
Metabolic pathways
gai01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IMCC3135_22520 (capD)
Enzymes [BR:
gai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.115 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting)
IMCC3135_22520 (capD)
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Motif
Pfam:
Polysacc_synt_2
Epimerase
Polysacc_syn_2C
3Beta_HSD
GDP_Man_Dehyd
NAD_binding_10
NmrA
NAD_binding_4
RmlD_sub_bind
KR
adh_short
Sacchrp_dh_NADP
F420_oxidored
NAD_Gly3P_dh_N
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
ASJ74574
UniProt:
A0A2Z2P413
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Position
complement(5122696..5123706)
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AA seq
336 aa
AA seq
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MFEDKCLMITGGTGSFGHAVLSHFLSTDVREIRVFSRDEKKQEEMRILLNNPKIRFYIGD
VRSRDSLDQAMKGVDYVFHAAALKQVPSCEFYPMEAVQTNIMGTENVMLAAAANGVQKVV
VLSTDKAVYPINAMGISKAMAERLVIAKSRMQQDGETIFCATRYGNVMASRGSVIPLFVS
QIESGKAITVTDLNMTRFLMSLEDSVDLVMYAYQHGLQGDIFVQKSPASTVADLAQALNE
LFGHENPLQIIGTRHGEKLHESLISREEMARAIDLGKYYRIPADNRDLNYAKYFSDGEET
ITTAEDYTSQNTVRLDVEKTKQLLLSLDYIKDRLHA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgaagacaagtgtttgatgattaccggtgggactggctcgttcggccatgcagtc
ctgagccactttttgtcaacggatgtgcgagaaattcgagttttcagtcgtgacgagaag
aagcaagaagagatgcggattctattgaacaatcccaagatacggttctatatcggtgat
gttcgaagtcgagatagccttgatcaagcaatgaagggagttgactatgtgtttcatgcg
gcagctttgaagcaagtgccatcgtgcgagttctatccgatggaggccgtacagaccaac
atcatggggacggaaaacgtcatgcttgcggcagcggccaacggagtccagaaggtcgtg
gtattgagcactgacaaggctgtgtatcctattaacgccatgggtatatcgaaggcgatg
gctgagcggctcgtcattgccaagtcacgaatgcagcaagatggggagacaatcttttgt
gcaactcgctacgggaatgtgatggcttcccgcggttctgtgatacccctgtttgtttcg
caaattgaatcaggcaaggcgattaccgtcacggatttgaatatgactcgcttcctgatg
tcactcgaagattcagtggatctggtcatgtacgcctaccagcatggcttgcagggggac
atttttgtacaaaagtcaccagcatcaactgtcgcagacttggcacaggcgctgaatgaa
ttgtttggacatgaaaatccgctacaaatcatcggcacacgacatggtgagaaactccac
gaatcacttatctcacgagaggagatggcgcgtgccattgatctgggcaagtattaccgg
ataccggctgataatcgtgatctgaattacgcaaagtatttcagtgatggggaggagaca
ataacgacagctgaggattacacatcacaaaacacggtgcgattagatgtcgaaaaaacc
aaacagcttttgttgagcctggattacatcaaggatcggctacatgcttaa
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