Grus americana (Whooping crane): 129195573
Help
Entry
129195573 CDS
T11359
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
game Grus americana (Whooping crane)
Brite
KEGG Orthology (KO) [BR:
game00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
game04040
]
129195573 (SCN4A)
Ion channels [BR:
game04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129195573 (SCN4A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
129195573
NCBI-ProteinID:
XP_054657729
LinkDB
All DBs
Position
22:complement(8941346..8988752)
Genome browser
AA seq
1865 aa
AA seq
DB search
MMSRPFTLFLCSAGWAQASQKQNERMAGLPHIPGPENLRPFTPASLAAIEQRIAEAEALK
VKRQQVELPEEEEIKPSSDLEAGKNLPLIYGDPPLELIGTPLEDLDPFYKDKKTFIVLNK
GKSIFRFSATPALYLLGPFHPIRRGAIKVLIHSLFSMFIMITILTNCVFMTLSNPPAWSK
NVEYTFTGIYTFESLIKILSRGFCIDNFTFLRDPWNWLDFMVISMAYITEFVDLGNISAL
RTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQ
KCVRWPPLNDTLLGDLGLDNDTLANATLYGNFTDGIVSNFTSNFTSNSTFDFEAYINDEA
NFYFLEGALDALLCGNSSDAGKCPEGYQCMKAGRNPNYGYTSYDTFSWAFLALFRLMTQD
FWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYAEQNDATLLEEQQKEE
EFQQLMEQLKKHQEEQEKMLQDRRSTSGSLPSSAAEKERDSDLSSDQDKAKDCNGQVVPK
VVLERSATVIEFNPTNEPEKSNHNHLTVGNQDGPGLEKRVGSAASVISNAVEELEEAHQK
CPSWWYKFAHTFLVWNCCPLWLKLKAFVKLVVMDPFVDLGITICIVLNTVFMAMEHYPMT
EEFENVLTVGNLVFTGIFTAEMVLKLIALDPYEYFQQGWNIFDSIIVTLSLVELGLANVQ
GLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFG
KSYIECVCKISLDCTLPRWHMNDFFHSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFM
MVMVIGNLVVLNLFLALLLSSFSADSLAASDDDGEMNNLQIAIGRITKGIDFVKTSVLML
LHRLWKGKKVAPEEEQEPNKRDNSVLNHVDTGQEPKSEYLDGVTGKEHYFMDELDHMNFI
NNPNLTVQVPIASEESDLYEETSTQSDTEDAKNPLSSDNASSLCSTVDYKPPLPVEEEVA
EEAEDSNEPEECFTEACVKRFPCLYVDITSDRGKVWWNIRKTCFRIVEHDWFETFIVFMI
LLSSGALAFEDIYIEQRKAIRTILEYADKVFSYVFVIEMLLKWVAYGFKVYFTNAWCWLD
FLIVDVSIISLTANWLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIM
NVLLVCLIFWLIFSIMGVNLFAGKYYRCVNTTSGELFDISVVNNKSDCMALLYTNEVRWV
NVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSREIEEQPVYEINLYMYIYFVIFIIF
GAFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNK
FQGMVFDLVTKQVFDIIIMILICLNMVTMMVETDDQSELKTSVLYKINLIFIVIFTGECV
LKMFALRYYYFTIGWNIFDFVVVILSILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRL
IRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKEAGIDDIFNFET
FGNSMICLFQITTSAGWDGLLSPILNSSPPDCDPDVENPGSSVKGNCGNPSIGIFFFCSY
IIISFLIVVNMYIAIILENFNVATEESSEPLCEDDFEMFYETWEKFDPDATQFIAYSTLS
DFVDTLQEPLKIPKPNKIKLITMDLPMVAGDKIHCLDILFALTKEVLGDSGEMDALKATM
EEKFMAANPSKVSYEPITTTLKRKHEEVCATKIQRAFRRYLLRRSVKQASYMYRHSKDED
SLREDAPEKEGLIATKMHEMFGNSGTDVETAPAFGLAPVPSSETQDAPGKAKAWDKERVV
KESLV
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atgatgagccgtccattcacgttgtttctgtgttcagcaggctgggcgcaggcgtcccag
aagcagaatgagaggatggccggcctgccgcacatcccgggccccgagaacctccgcccc
ttcacgcccgcctcgctggctgccattgagcagcgcatcgccgaggcagaggcactcaag
gtaaagcggcagcaagtggagctgcctgaggaagaggagatcaagcccagcagtgacctg
gaagctggcaaaaacctgcccctcatctatggtgacccaccgctggaactcatcgggacc
cccctggaggacctggaccctttctataaggataagaagacattcatagtcctcaacaaa
gggaagtccatcttccgcttctcagcgacgcctgctctctacctgctggggcccttccac
cccatccgcagaggagccattaaagtgcttatccattctttattcagcatgttcatcatg
atcacaattctaaccaactgtgtgtttatgacgctgagcaaccccccggcgtggtccaag
aacgtggaatacaccttcactgggatatacacctttgagtccctcatcaagatactgtcg
agaggcttctgcatcgacaacttcacattcctgcgcgacccgtggaattggctggacttc
atggtcatctccatggcctacatcaccgagttcgtggacctggggaacatctctgctctc
aggaccttccgtgtcctccgtgccttgaaaaccatcacagtgataccagggctgaagacg
atcgttggggctctgatccagtcagtgaagaagctctcggatgtcatgatcctcaccgtc
ttctgcctgagtgtgttcgccttaatcggtctccagctcttcatggggaacctccggcag
aagtgtgtgcggtggccccccctcaatgacaccctgctgggggacttggggctggacaac
gacacgttggccaacgcaacactctacggcaacttcactgatggcattgtcagcaacttc
accagcaacttcaccagcaacagcacctttgatttcgaggcctacatcaatgatgaagcc
aatttctactttctggagggagcgcttgacgccctgctctgcgggaacagcagcgatgct
gggaagtgccctgaagggtaccagtgcatgaaggcggggaggaacccgaactacggctac
accagctacgataccttcagctgggctttcctggccctcttccgcctcatgacgcaggac
ttctgggaaaacctcttccagctgacactgcgtgcagcagggaagacatacatgatcttc
ttcgtggtggttatatttcttggttccttctacctcatcaacctcatcctcgctgtggtg
gccatggcttacgcagaacaaaatgacgccacgttgctggaggagcagcagaaggaggag
gaatttcagcagctcatggagcagctgaagaagcatcaagaggagcaagagaagatgttg
caggaccggcggtccaccagcggttccctgcccagcagtgcggctgagaaggagcgtgac
tcggacctgagcagtgaccaggacaaggcaaaggactgcaatgggcaagtggtccccaag
gtcgtgctggagcggtctgctacggtgattgagttcaacccaaccaacgagccggagaaa
tcaaaccacaaccacctcactgtgggcaaccaagatgggccaggccttgagaagagagtg
gggagcgccgccagtgtcatctccaacgctgtggaagagctggaggaagctcaccagaag
tgcccgtcctggtggtacaaatttgcccacacattcctggtctggaactgctgtcctctg
tggctgaagctgaaggcatttgtcaagctggtggtgatggaccccttcgtggacctgggc
atcaccatctgcattgtgcttaacacagtcttcatggccatggagcattaccccatgaca
gaggagtttgagaacgtgctgaccgtggggaacctggtctttacggggatcttcacagca
gagatggtcctgaagctcattgctctggacccctacgagtatttccagcagggctggaac
atctttgacagcatcatcgtcaccctgagcctggtggagctgggcctggccaacgtacaa
gggctgtccgtgctccgctccttccgcttgctgagggttttcaagctcgccaagtcctgg
cccaccctcaacatgctcatcaagatcatcggtaactcggtgggcgcgttggggaacctc
acactggtgttggccatcatcgtcttcatcttcgccgtggtggggatgcagctctttggg
aagagctatatagagtgtgtgtgcaagatctccctcgactgcacgctgccccgctggcac
atgaatgacttcttccactccttcctcatcgtcttccgcatcctctgtggggagtggatt
gagaccatgtgggactgcatggaggtggccggccagaccatgtgcctcatcgtcttcatg
atggtcatggtcattggaaaccttgtggtgctgaacctgttcttagctttgctgctgagc
tccttcagcgccgatagcctggcagcgtctgacgacgacggagagatgaacaatttgcag
attgctattggcagaatcaccaaggggatcgactttgtaaagacctctgtcctcatgctg
ctccacaggctgtggaaggggaagaaggtggccccggaggaagagcaagagccaaataag
agagacaactctgtgctaaaccatgtggacactggccaggagcccaagtcggagtacctg
gatggagtcactggcaaagagcattatttcatggatgaactggaccacatgaatttcatt
aacaaccccaacctgacggtgcaggtccccatcgcctcggaggagtctgacctctacgag
gagacgagcacccagtccgacactgaagatgccaagaatcccctctccagcgacaatgcg
tcgtccctgtgcagcaccgtggattacaagcccccactgccggtggaggaggaggtggcg
gaagaggctgaagacagcaatgagcccgaggagtgcttcactgaagcctgtgtgaagagg
tttccctgcctctatgtggacatcaccagcgacagagggaaggtatggtggaacatccgg
aaaacctgcttccgtatcgtggagcacgactggtttgagaccttcatcgtcttcatgatc
ctcctcagcagtggggcgctggcttttgaggacatctacattgaacaaagaaaggcgata
cgtaccatcctggagtacgccgacaaggtcttctcctacgtcttcgtcattgagatgttg
ctcaagtgggtggcctatggcttcaaggtgtatttcaccaacgcgtggtgctggctggat
ttcctcattgttgatgtgtccattatcagcctgacagcgaactggctgggatactctgag
ctgggagccatcaagtccctgcggacgctgagggctctgagaccactgcgtgccctgtcc
agatttgaaggcatgagggtggtggtgaacgccttgctgggcgccatcccctccatcatg
aatgtcctgctggtctgcctcatcttctggctgatattcagcattatgggggtgaacctc
tttgcaggaaagtactaccgatgcgtcaacaccacctcaggggagctctttgacatcagc
gtggtgaacaacaagagcgactgcatggccctcctctacaccaacgaggtcagatgggtc
aacgtcaaggtcaacttcgacaacgtgggcttgggatacctctccttgctgcaggtggcg
accttcaaaggctggatggacatcatgtacgctgccgtggactcacgcgagattgaagag
cagccagtgtatgagatcaacctctacatgtacatctacttcgtcatcttcatcatcttc
ggtgccttcttcaccctgaacctcttcattggcgtcatcatcgacaacttcaatcagcag
aagaaaaagtttggaggcaaagacatcttcatgacggaagagcagaagaaatactataat
gccatgaagaagctcggctccaagaaaccccagaagcccatccccaggccatcgaacaag
tttcaagggatggtgtttgacttggttaccaagcaagtgttcgatataatcatcatgatc
ctgatttgtcttaacatggtgactatgatggttgaaacagatgatcaaagtgaactcaaa
acatctgtcctctataagatcaacctgatcttcattgttatcttcaccggagagtgtgtg
ctcaaaatgttcgccttgcgctactactacttcactattggctggaacatctttgacttt
gtggtggtcatcctctccatcttaggtatcgtcctctcggacatcatagagaagtacttc
gtatcacccaccctcttcagggtcatcaggctggcaaggattggccgtgtcctccggctg
atccgaggggcgaaaggcatccggactctcctgtttgctctgatgatgtccctgcctgcc
ctgttcaacatcggcctcctgcttttcctcgtcatgttcatctactccatcttcgggatg
tccaacttcgcctatgtaaagaaggaggcagggatcgatgacatcttcaactttgaaact
tttgggaacagcatgatctgcctcttccagatcaccacgtcggctggatgggatggcctc
ctcagcccaatcctgaacagcagccccccagactgcgaccccgacgtggaaaaccctggc
agttcggtaaaagggaactgtggcaatccatccatcggcatcttcttcttctgcagctac
atcatcatttcctttctcatcgtggtgaacatgtacattgccatcatcctggagaacttc
aacgtggccacagaggagagcagcgaacctctctgtgaagacgattttgaaatgttttat
gaaacttgggagaagtttgacccagatgccacccagttcattgcatacagcaccttgtct
gactttgtagacaccttacaggagccactcaaaattcccaagccaaacaagatcaagcta
atcaccatggatctaccaatggttgctggggataaaattcactgtctggatatccttttt
gccctgactaaggaagtgctgggagactcgggagagatggatgccttgaaggccaccatg
gaggagaagttcatggccgcaaacccctcaaaggtttcctatgaacccatcaccaccact
ctgaaaaggaaacatgaggaagtctgtgctacaaaaatccagagggctttccggaggtac
ctcctaagacgctcggtgaagcaggcatcctacatgtacaggcacagtaaggacgaggat
tccctgagagaggacgcacctgagaaggaaggtctgatcgccaccaaaatgcatgagatg
tttgggaacagtgggacagatgtggagacagcccctgcctttggtcttgcacccgttccc
agctcagagactcaagatgctcctggcaaagcaaaagcatgggacaaggaacgcgttgtg
aaagagtcgctggtataa
DBGET
integrated database retrieval system
