Grus americana (Whooping crane): 129195591
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Entry
129195591 CDS
T11359
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
game Grus americana (Whooping crane)
Pathway
game03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129195591 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
game03041
]
129195591 (EFTUD2)
Spliceosome [BR:
game03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129195591 (EFTUD2)
Complex C
U5 SnRNP specific factors
129195591 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
129195591
NCBI-ProteinID:
XP_054657760
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Position
22:complement(8343675..8365874)
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGRESKDLDELEDDDDDDDMGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacctgtacgacgagtttgggaactacatcgggccggagctggactcggac
gatgacgacgacgagctgggcagagagtctaaagatctggatgagcttgaggatgatgac
gatgatgacgatatgggggaccatgatgaggaccatcctgggatggaggtggtgctgcat
gaggataagaaatactatcccaccgctgaggaggtctacgggcctgaagtagagacgata
gtacaagaggaagacacgcagcctctcactgagcctattattaaacctgtgaaaaccaaa
aaattctctctgatggaacagacgttaccggtcactgtctatgagatggatttcctggca
gatctgatggacaactcggagctaattcgaaatgtgactctgtgtgggcaccttcaccac
ggcaagacttgttttgttgactgcctgatagaacagacacacccagaaatccggaagcgc
tacgaccaggatctttgctacactgatatattgttcacagagcaagagaggggagtaggg
atcaagagcacaccagtgacgattgttctgccggacaccaaaggaaaatcttttctcttc
aacatcattgacacaccaggtcacgtcaatttttctgatgaggtgacagccggccttcgt
atttcagacggagttgtacttttcattgatgcggccgagggggtgatgctgaacacagag
aggctgatcaagcacgcggtgcaggaaaggctcgcagtgactgtgtgcatcaacaagata
gaccgactgatcctggagctgaaattgccccctacagacgcgtattacaaactcagacat
atcgtagatgaagttaatgggctgatcagcatgtattccaccgatgagaacctcgttctg
tctccccttctggggaacgtgtgtttctccagttcacagtacagcatctgcttcacgctg
ggatcttttgcaaagatttatgcagacacatatggagacatcaattatcaggagtttgca
aagcggctttggggtgacatctacttcaacccgaagactcgcaaattcactaaaaaggcc
ccgacgagcagttcccagcgcagttttgtggagttcattctggagcccctgtacaagatc
ttggctcaggtggtgggggacgtggacacgaccctgcccaggactctggatgaacttggc
attcacttgaccaaagaggaattgaaattgaacattcggcccctcctgcggcttgtctgc
aagaagttcttcggggaattcacaggctttgtggacatgtgtgtgcagcacatcccctcc
ccgaaggtgggagccaagacgaaaatcgaacatacctacaccggtggtgttgactctgat
ctaggggaggccatgagtgaatgcgaccctgacggtccactgatgtgtcacacaacgaaa
atgtacagcacggatgacggcgttcagttccacgcctttggcagagtgctcagtggtacc
atccatgctgggcagcctgtgaaggtccttggagaaaactataccctggaagatgaggaa
gattcccagatctgcaccgttggacgcctctggatctcggtggcgaggtatcacattgag
gtaaaccgggttcctgccggcaactgggtgctgatagaaggagtggaccagcccatagtg
aagactgcaaccgtcacggagcctcggggcaatgaggaggctcagatcttccgtcctttg
aagttcaacaccacgtctgtcatcaaaatagctgtagagcctgtcaacccctcagagctc
cccaaaatgttagatggtctccgcaaagtcaacaagagttacccctcgcttactactaag
gtggaagagtctggggagcacgtgatcctggggacgggggagctctacctggattgtgtg
atgcacgacctacggaagatgtattcggagattgatatcaaggttgccgatccagttgtg
acattctgcgagacagtggtggaaacgtcctccctgaagtgctttgctgagacacccaac
aagaagaacaagatcactatgattgctgagcctctggagaagggacttgcagaggacatt
gaaaatgaagtggtccagataacatggaacagaaagaagctgggtgaattcttccagacc
aaatatgactgggatttgctggctgcccgttccatctgggcctttgggccagacgccact
ggcccaaacatcctagtagacgatacgctgccctcagaggtggacaagtcgctgctgggc
tctgtgaaggacagcattgtgcagggatttcagtgggggaccagggaagggcctctctgt
gacgaattgatccgcaatgtgaagtttaagatcctggatgcagtgattgctcaggagccc
ttgcaccggggtggaggacagatcatcccgacggcccgcagagtggtctattccgctttc
ctgatggccacccctcgcttgatggagccctactacttcgtggaggtgcaggctcctgcc
gactgcgtgtctgcggtgtacacggtcctggctaggcggagaggccacgtgacgcaagat
gctccgatcccaggctcccctctctacaccatcaaagccttcattccagccattgactca
tttgggtttgagacagacttgaggacccacacgcagggacaagccttctcgctctctgtc
ttccaccactggcagattgtgcctggtgaccccttggacaagagcatcgtcatccgaccc
ctggagccccagccagccccgcatctggccagagagttcatgatcaagaccaggcgtagg
aagggcttgagcgaggacgtcagcatcagcaagttctttgatgaccccatgttgctggag
ctggccaaacaagatgttgttctcaactaccccatgtga
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