KEGG   Grus americana (Whooping crane): 129209057
Entry
129209057         CDS       T11359                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
game  Grus americana (Whooping crane)
Pathway
game03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:game00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129209057 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:game03041]
    129209057 (SMNDC1)
Spliceosome [BR:game03041]
 Complex A
  U2 snRNP components
   U2 related factors
    129209057 (SMNDC1)
 Complex B
    129209057 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    129209057 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 129209057
NCBI-ProteinID: XP_054688805
LinkDB
Position
7:11843835..11855325
AA seq 278 aa
MPLVASVDVNPLRTAAAAPQDSSLPAPRSRSTEGHGRLPEMSEDLAKQLASYKAQLQQVE
AALSGNAENEDLLKLKKDLQEVIELTKDLLSTQPSETLASSDSSASALPSHSWKVGDRCM
AIWSEDGQCYEAEIEEIDEENGTAAVTFAGYGNAEVTPLFNLKPVEEGRKAKEDSGNKPM
SKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNKKGQVKRSIFA
SPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 837 nt   +upstreamnt  +downstreamnt
atgccgctggtcgcgtcagttgatgtcaatcccctcaggacagccgcagcagcgccacag
gacagttccctccccgccccgcggagccgcagcacggagggccacgggcgtttgcctgag
atgtcggaagaccttgctaagcagttagctagttacaaagctcaacttcagcaagttgag
gctgccttatctgggaatgcagaaaatgaagacttactaaaactgaaaaaagacttacag
gaagtcatagaattaaccaaagatctcctttcaacacaaccttctgaaactcttgcaagt
tctgacagttctgcttctgccctacccagtcactcctggaaggttggggataggtgtatg
gcgatatggagtgaggatggacagtgttatgaagctgagattgaagaaatagatgaggag
aatggaacagctgcggtcacatttgctggatatggcaatgctgaagttacacctctgttc
aacctcaagcctgtggaagagggaagaaaagcaaaagaggacagtggcaacaaacccatg
tccaaaaaagagatgatagcccagcaacgagagtataaaaagaagaaagctttgaaaaaa
gctcagagaattaaagaacttgagcaggaacgggaggaccagaaagtcaagtggcaacag
ttcaacaacagagcctattctaaaaacaaaaaaggccaggtaaagaggagtatttttgct
tcccctgagagcgtaactggcaaggttggagttggaacatgtggaattgcagacaaacct
atgacacagtatcaagatacctctaaatataacgtcaggcatttgatgcctcagtaa

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