Grus americana (Whooping crane): 129209199
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Entry
129209199 CDS
T11359
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
game Grus americana (Whooping crane)
Pathway
game04514
Cell adhesion molecule (CAM) interaction
game04517
IgSF CAM signaling
game04520
Adherens junction
game04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
game00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129209199 (PTPRF)
04517 IgSF CAM signaling
129209199 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
129209199 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
129209199 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
game01009
]
129209199 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
game04515
]
129209199 (PTPRF)
Enzymes [BR:
game01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
129209199 (PTPRF)
Protein phosphatases and associated proteins [BR:
game01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
129209199 (PTPRF)
Cell adhesion molecules [BR:
game04515
]
Immunoglobulin superfamily
Type II RPTP family
129209199 (PTPRF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_VIN3
Fn3_ROS1
Ig_2
Fn3_PBP1
ig
fn3_2
Interfer-bind
PTP-SAK
Ig_VEGFR-1-like_5th
Tc-R-P
DSPc
V-set
Y_phosphatase3
fn3_SORL1
C2-set_2
PTPlike_phytase
PTP-NADK
Ig_C17orf99
Fn3_PTPRU
Insulin_TMD
DUF3377
TMEM154
ICAM_N
Motif
Other DBs
NCBI-GeneID:
129209199
NCBI-ProteinID:
XP_054689226
LinkDB
All DBs
Position
8:23758131..24146469
Genome browser
AA seq
1918 aa
AA seq
DB search
MVPNFCVPVLTVPAAILCCLMLPLAGADSKPTFMKAPEDQIGISGGVASFVCQATGEPKP
RITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKL
TVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNG
RIKQLRSGGTPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSI
PPSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIVQSANY
TCVAISSLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKP
KSLEGQFQEVDGVATTRYSIGGLSPFSEYEFRVIAVNNIGRGPPSELVEARTGEQAPSSP
PLKVQARMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDSHLPLSMWQKHNTDDSHLTTVG
SLITGTTYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPAS
QERITKYELLYWEGEDGTQQKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGVGVYTPTI
EARTAQSTPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVEGDDNTKH
VVDGIGREHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESIPVHVRTDEDVPSAPPRKVEV
ESVNSTAIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLSEAQWRAEDS
VDHETVIGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTAMNTAL
IQWHPPKEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYLFKLSAKNR
AGPGEEFEKEITTAEDVPSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGKIVNYTVVYRD
INSQQDLVNITKDTSITLMNLKPDTTYDIKVRARTNKGVGPLSPSIQSRTMPVEQVFAKN
FRVNAVMKTSVLLSWEVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPDTDYSFVL
MNRGSSAGGLQHLVSIRTAPDVLQSKPIATNKYIQEGKFTLTLPKVQTTVPVRWYYIVVV
PADQSTSSPTARWRTPDEMELDQLLEAISQGSQSRRQRRQADRLKPYIAAQVDVLPETFT
LGDEKNYKGFYNKPLSQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVASAKQQDEPE
MLWVMGPVLAVILIIIIVIAILLFKRKRAHSPSSKDEHSIGLKDSLLAHSSDPVEMRRLN
YQTPGASVPSCPNISSMRDHPPIPVTDLADNIDRLKANDGLKFSQEYESIDPGQQFTWEN
SNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPE
TLSDFWRMVWEQRTATIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTLLDTVELATYT
VRTFALYKNGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMVVHCS
AGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAAT
CGNTEVPARNLFAHIQKLTQVPPGESVTAMELEFKLLANSKAHTSRFISANLPCNKFKNR
LVNIMPYELTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWE
HNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARD
GQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVF
ITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacttctgcgtcccagtactcactgtgccagcagccatcctctgctgcttg
atgctgcctttagcaggagcggacagcaagccaacgtttatgaaagctcctgaagatcag
attgggatttctggaggagtggcctcttttgtgtgtcaggcaacaggagagcccaaacct
cgtatcacatggatgaagaaggggaagaaagtcagttctcagcggtttgaggttattgag
tttgatgatggatcaggatcagttctgcggatacagcccctgcgtgttcatcgagatgaa
gctatctatgagtgcacagcaaccaatagtgttggggagataaacacgagtgccaaatta
acagtgttagaagaagaccacctcccagctggcttcccaaccattgacatgggcccgcag
ctgaaggtggtggaaaaggcccgcacagccacaatgctctgtgccgccagcggaaaccct
gatcctgaaatctcctggttcaaggacttcctgcctgttgacactgcgactagcaatggg
cgaatcaagcagctccgctcgggtggtacaccgatcagaggagccctgcaaatagagaac
agtgaggagtcagaccaaggcaaatacgaatgtgttgcaaccaacagcgcgggaacccgc
tactctgccccagccaacctttacgttcgagtgcggcgtgttgctcctcgattctctatc
cctccgagcaaccatgaggtgatgcctggggggagcgtgaacctcacgtgcgtggcagta
ggtgctccaatgccctatgtgaagtggatggccggtgtggaggaactgaccaaagaggat
gagatgcccgtcggtaggaacgtcctggagctgaataacatcgtgcagtctgccaactac
acctgcgtggccatctcctccctcggcatgatcgaagccacagcccagatcactgtcaaa
gcactgccaaaacctccaacagagccattagtgactgaaacgacagctaccagcgtgacc
ctcacctgggattcaggcaactctgaccccatttcatattacgtcatccagtacaagccc
aaatccttggagggtcagttccaggaggtggatggtgtggcaacaacccgctatagcata
ggtgggctcagccccttctcagagtatgagttccgggtcatcgcggtcaataacattggc
aggggtccccccagtgagctggtcgaggcccggacaggagaacaagctccttcaagtcca
cccctcaaagtccaggcacggatgctgagcgccagcaccatgctggtccagtgggagcag
ccagaggagccaaatggacagatcagagggtaccgcgtttactataccactgactcgcat
ctgcctttgagcatgtggcagaaacacaacaccgacgacagccacctcaccactgtgggg
agcctcatcacagggaccacatacagcatccgcgtcctggcctttacttcggtgggtgac
gggcccccctcggacatcatccaggtcaaaacacagcaaggggttcccgcccagccagct
gacttccaggcagaagcagagtctgatacccgcatccttttgacatggctgcctgcctct
caggaacgcattaccaaatacgagctgctgtactgggaaggggaggatggcactcagcaa
aaagtggagtttgacccaacctcctcgtatgctgtggaaggtctcaaaccagacacgctg
tataagttccgtctgggtgcccgctcggagctgggagtaggagtctacacccccacaatc
gaagccagaactgcccaatccaccccctccgccccaccccaagaagtcgagtgtgtaagc
accagctccactaccatccgggtaagttgggtgccaccgcctgcccagagccgcaatggg
gtcatcacccagtactccattgcgtaccaggcagtggaaggagatgacaacaccaagcat
gtggtggatggcattggacgggagcactccagctgggagatcaaggacctggagaaatgg
accgagtacaaggtgtgggtaagggctcacaccgatgtggggccaggaccggagagcatc
cctgtgcatgtgcgcactgatgaggatgtgcccagcgccccaccgcgaaaggtggaggta
gagtctgtgaattcaactgccatccgggtgagctggaagctgcccatctctaacaagcag
catgggcagatccgtgggtaccaggttacatacgtgaagctggaaaacaacgagccccga
gggcagccagtgatcaaggacgtcatgctgtcggaagcacagtggagagctgaggactcc
gtcgaccatgagacagtcattggaggcctgctgccggaaaccacctactccgtcacggtc
gctgcctacaccaccaaaggagatggtgcccgcagcaagccaaaagtcatcaccaccaca
ggggcagtcccggggaagcccaccatgatgattagcacgacagccatgaacacagccctc
atccagtggcacccacccaaggagatggtaggggagctgctgggttaccggctgcagtac
agacgtcttgatgaggaaaagatgaacacgatagacttcgggaagagagaccatcactac
actgtgaccaacctgcacaagggggccacgtacctcttcaaattgtctgccaagaacaga
gctggtccaggagaggagtttgagaaggagatcactactgcggaagacgtgccaagcggc
tttccacagaacctgcgcgtggtgggtctcaccacttccaccacagaagttgcatgggac
cccccagtcttggcagaaagaaacggcaagatcgttaactacacagtggtatacagggac
ataaatagccagcaggacctggttaacatcaccaaggacacgagtatcactttgatgaat
ttgaagcccgataccacttacgacatcaaagtgcgggcccgcaccaataagggggttggg
ccgctcagccccagcatccagtcccggaccatgcctgttgagcaagtgtttgctaagaac
ttccgcgtcaatgccgtcatgaaaacgtctgtgttgctgagctgggaagtgcctgactcg
tataaatctgcagtgccttttaagattctgtacaatagccagagtgtggaggtggacggc
cactcgatgaagaaactcataagtgacctccagccagacacggactattcttttgtgcta
atgaatcgtgggagcagtgctggggggctccagcacctcgtctcaatccgcaccgctcct
gatgtcttgcaaagcaaacccatcgccacaaacaagtacatacaggaaggaaaattcacg
ctcacccttcccaaagtccagaccactgtgccggttaggtggtactatatcgtggttgtg
ccagcggatcagagcaccagcagcccgactgctcggtggcggacacctgatgagatggag
ctggaccagctgctggaggccataagccaagggagtcagagcaggcgccagcgacgccaa
gcagacagactcaagccctacattgctgctcaagtggatgtgctgcctgagaccttcacc
ctgggcgacgagaagaactacaaaggtttctacaacaagcccctgtctcaagacctgagc
tatcgctgctttgtgctggcttcactggaggatggagacacgaagagatatgcagccagc
ccctactcggatgagatcgtgatggaagtggcttcagcaaagcagcaggatgaaccagag
atgctgtgggtgatgggacccgtcctggctgtgatattaatcatcatcattgtcattgct
atactcctcttcaaaaggaaaagggcacactccccctcttccaaggatgagcactccatc
ggcctgaaggactcactcttggcccactcctctgacccggttgagatgaggcggctcaac
taccagactccaggtgccagtgtccccagttgcccgaatatctcaagcatgcgtgaccac
ccccccatccccgtgacggacctcgccgacaacatcgacaggctgaaagccaacgacggg
ctgaagttctcccaggagtacgagtccattgatccagggcagcagttcacctgggagaac
tccaacctggaagtgaataaaccgaaaaaccgctatgcaaatgtgatcgcctatgaccac
tcacgtgtcatcctgacctccatcgatggggtcccaggcagtgattacatcaatgccaat
tacattgatgggtatcggaagcagaacgcctacattgccacacaaggacctctgccagaa
accctcagcgacttctggaggatggtgtgggaacagagaacagcaactatagtcatgatg
accaggctggaggagaagtccagggtaaagtgtgaccagtactggccgagccggggtacg
gaaacctatgggatgatccaggtgacactgctggacacagttgagctggcaacctacact
gtccgcacctttgcattgtacaagaatggctccagcgagaagcgagagctgcgacagttc
cagttcatggcttggcctgatcatggggtaccagaatacccaaccccgatcttagctttc
ctgcgacgggtcaaggcttgtaacccaccggatgctgggcccatggttgtccattgcagt
gccggcgtgggccgaactggttgcttcattgtcattgacgccatgctggagcggatgaag
catgagaagaccgtggacatctatggccacgtgacgtgcatgcgctctcagcgcaactac
atggtgcagacagaggaccagtacatcttcatccacgaggccttgctggaggcagccacg
tgtggcaataccgaggtgcctgcacgcaacctctttgctcacatccagaagctgacccag
gtgccaccaggcgagagcgttactgcaatggagctggaattcaagctgctggccaactct
aaagcacatacctcacgtttcatcagtgccaacctcccatgcaacaaattcaagaaccgc
ctcgtgaacatcatgccatatgagctgacgagagtctgtctgcagcccattcggggtgtc
gagggctccgattacatcaacgccagcttcatagatgggtacaggcagcagaaggcctac
atcgccacgcagggaccgctggccgagaccacagaggatttctggcggatgctctgggag
cacaactccaccatcgtggtgatgttgacaaagctgcgcgagatgggccgggagaaatgc
catcagtactggcctgcggagcgctctgcccggtaccagtacttcgtggtggaccccatg
gcagagtacaacatgccacagtacatcctccgggagttcaaggtgacggatgccagggac
ggccagtcacggaccatccgccagttccagttcacagactggcctgagcagggagtgcca
aagacgggagagggcttcatcgacttcattgggcaggtgcacaagaccaaggagcagttt
gggcaggacgggcccatcacggtgcactgcagcgctggggtcgggcgcacaggtgtgttc
atcacgctcagcatcgtgctggagaggatgcgctacgagggggtggtggacatgttccag
acggtgaagaccttgcgaacgcagcggccagccatggtgcagacagaggaccagtaccag
ctgtgctatagagcggcactggagtatctcggcagcttcgaccactatgcaacgtaa
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integrated database retrieval system
