Grus americana (Whooping crane): 129214477
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Entry
129214477 CDS
T11359
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
game Grus americana (Whooping crane)
Pathway
game00514
Other types of O-glycan biosynthesis
game04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
game00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
129214477 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129214477 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
game01003
]
129214477 (RFNG)
Enzymes [BR:
game01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
129214477 (RFNG)
Glycosyltransferases [BR:
game01003
]
Glycan extension
O-Glycan
129214477 (RFNG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
129214477
NCBI-ProteinID:
XP_054702098
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All DBs
Position
18:239036..247368
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AA seq
379 aa
AA seq
DB search
MSGSCLGLRKACFLLSVSAAALLLLLLPRGQPPAAPRRRPPPAAGPSGPPPQQAGPGESG
VPGTRAGSRGEPGGGAGAGGRGGGLAGSPQPARKGRLGPAGGSARESLELKDIFIAVKTT
RKYHKSRLDLLLQTWISQARGQTFIFTDWEDRELRLKAGDHMINTNCSAVHTRQALCCKM
SVEYDKFLESGQKWFCHVDDDNYVNPRTLLRLLSAFSHSQDVYVGRPSLDHPIEAADHVQ
SDGSKTTVKFWFATGGAGFCISRGLALKMSPWASLGNFISTAERVRLPDDCTIGYIIEGL
LEVKLLHSPLFHSHLENLQRLQGESVLQQVTLSYGDPENKHNVVSVGGVFGLQQDPTRFK
SVHCLLYPDTIWCPAKKMS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctcctgcctggggctccgcaaggcctgcttcctgctgtccgtcagcgccgcc
gccctcctcctcctcctgctgccgcgggggcagccccccgccgcgccccgccgtcgcccg
ccgcccgccgccgggcctagcgggcccccgccgcagcaggcgggccccggggagagcggc
gtgcccggcacgcgggcgggctctcgcggggagccgggcggcggggccggggcgggcggc
cggggcgggggcctcgccggcagcccgcagcctgcgcggaagggccgccttgggcctgcc
gggggctcggccagggagagcctggagctgaaggatatcttcatcgcggtgaagaccacg
aggaagtaccacaagagccggctggacttgctcctccaaacctggatctctcaggcgagg
ggacagacgtttatattcacagactgggaggatcgggagctacgcctgaaagcaggggat
catatgatcaacaccaactgttctgctgtccatacccggcaagctctctgctgcaagatg
tctgtggaatatgataaatttctggaatctgggcaaaaatggttttgccatgtggacgat
gacaactatgtgaaccctcggactctactgcgtctcttatctgccttttcacacagccag
gatgtctatgtggggcgaccgagtctggatcatcccattgaagcagctgaccatgtccaa
agtgatggatcaaaaacaaccgtgaaattctggtttgccacaggtggagcagggttctgt
atcagcagaggtcttgccctgaagatgagtccctgggccagcctgggtaatttcatcagt
accgcagaaagagtgcgtcttcctgatgactgcactattggctacatcattgaagggctg
ctggaggtaaagctgctgcacagcccattgttccattcccatctggaaaatctgcagaga
ctacaaggcgagtctgtgctgcagcaggtaaccctaagttatggggaccctgagaacaaa
cacaatgttgtgagcgtgggaggagtgtttggccttcagcaagatccaacccgatttaaa
tctgtccattgtctgctctatcctgacactatttggtgccctgctaagaagatgtcataa
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