Gordonia amicalis: IHQ52_18395
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Entry
IHQ52_18395 CDS
T08222
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
gami
Gordonia amicalis
Pathway
gami00300
Lysine biosynthesis
gami00550
Peptidoglycan biosynthesis
gami01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IHQ52_18395
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IHQ52_18395
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gami01011
]
IHQ52_18395
Enzymes [BR:
gami01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
IHQ52_18395
Peptidoglycan biosynthesis and degradation proteins [BR:
gami01011
]
Precursor biosynthesis
Amino acid ligase
IHQ52_18395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
UKO90958
LinkDB
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Position
complement(4015313..4016998)
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AA seq
561 aa
AA seq
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MTSRGSTGKGSAGRRKGKKLPGRPREVAPTSATVLSTATGARLDLVGGADRDTSVQGVTL
RAQDVQPGDLFAALPGAATHGARFADQAVAAGATAILTDPAGRVELSRVLPPETAVAVLI
HPAPRTVLGTVSARVYGNPSQRLKLIGITGTSGKTTTSYLVEAALLAAGHSVGLIGTVET
RVNGVAQPSSLTTPEAPTLQALLAAMLEDGVDVVVMEVSSHALSLGRVDGAHFAIGAFTN
LSQDHLDFHGTMRAYFDAKAQLFVPSSPTHAVRAVVCVDDEWGRRMADLARRPGEAAHLQ
PVTVSTGATPAHWHAGPSDLVGDGTSHTPFTEPDGDHVLVIPLPGRYNVANGLLAVAVAH
AAGVPISTALDAVASVSVPGRLQRVDRGQPFLALVDYAHKPGAVEAVLATLRGQLGEGPG
RVAIVIGAGGDRDAGKRPLMGEAAARGAELVIVTDDNPRSEEPAAIRSEVLAGARAVDAA
ERPVAAEPIREVADRAAAIAEAIAWAGPGDIVLVAGKGHEAGQEINGVKHPFDDRDVVAR
ALESSTPQSAPAGSVAAEGDR
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctcgtggttccacgggcaaggggtcggccggtaggcgcaagggcaagaagctc
cccggtcgtccgcgtgaggtcgcgccgacatcggcgaccgtcctgtcgacggccaccggc
gcccggctcgacctcgtcggcggcgccgaccgcgacaccagcgtgcagggcgtgaccctg
cgcgcccaggacgtgcagccgggcgacctgttcgcggcactgcccggagcggccacccac
ggtgcgcgtttcgccgaccaggcggtcgccgcgggtgcgaccgcgatcctcaccgacccg
gccggccgggtcgaactcagccgcgtcctgccgcccgagaccgcagtcgcggtgctcatc
cacccggccccgcggaccgtgctcggcacggtgagcgcccgcgtgtacggcaatccctcg
cagcggctcaagctgatcgggatcaccggcacctcggggaagaccaccacgtcgtatctc
gtcgaggcggccctgctcgccgccggtcattcggtgggactcatcgggaccgtcgagacc
cgcgtgaacggcgtcgcccagcccagctcgctgacgacgcccgaggcgcccaccctgcag
gccctgctggcggcgatgctcgaggacggcgtcgacgtcgtcgtcatggaggtgtccagc
cacgcgctgtcgctcggacgcgtcgacggcgcccacttcgcgatcggggccttcaccaat
ctctcgcaggatcatctggacttccacgggacgatgcgcgcctacttcgacgccaaggcg
cagctgttcgtgccgtcgtcgcccacccatgcggtgcgcgccgtggtgtgcgtcgacgac
gagtggggtcggcggatggccgatctcgcgcgccggccgggggaggcggcgcacctgcag
ccggtgacggtgtcgaccggtgcgacgcccgcacactggcacgccggcccgtcggatctc
gtcggcgacggcacctcgcacacccccttcaccgaacccgacggcgaccacgttctcgtc
atcccgctgccgggccgctacaacgtggcgaacggcctgctggccgtcgccgtggcgcat
gccgcgggggtgccgatctccaccgccctcgacgcggtcgcgtcggtgagtgtcccggga
cgcctgcagcgcgtcgatcgtggacagccgttcctcgcgctggtcgactacgcccacaaa
cccggcgccgtcgaggctgtcctggcgaccctgcggggtcagctcggcgagggacccggt
cgcgtggccatcgtgatcggtgccggcggagaccgcgacgcgggcaagcgcccgctgatg
ggggaggccgcggcacgcggtgccgaactcgtcatcgtcaccgacgacaatccgaggtcg
gaggagccggccgccatccggtccgaggttctcgcgggcgcgcgtgcggtcgacgccgcc
gaacgtccggtggctgccgaaccgatacgcgaggtcgccgaccgcgcggccgcgatcgcc
gaggccatcgcctgggcgggtcccggcgacatcgtgctcgtcgcgggcaagggacacgag
gcagggcaggagatcaacggcgtgaagcatccgttcgacgaccgcgacgtcgtcgcccga
gcgctggaatcgtcgaccccgcagagcgcacccgccggctcggtggccgcggagggtgat
cgatga
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