Gracilinanus agilis (agile gracile opossum): 123231316
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Entry
123231316 CDS
T07702
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04140
Autophagy - animal
gas05014
Amyotrophic lateral sclerosis
gas05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123231316 (SMCR8)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
123231316 (SMCR8)
05022 Pathways of neurodegeneration - multiple diseases
123231316 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gas04131
]
123231316 (SMCR8)
Membrane trafficking [BR:
gas04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
123231316 (SMCR8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
123231316
NCBI-ProteinID:
XP_044513517
LinkDB
All DBs
Position
1:271864326..271869029
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AA seq
940 aa
AA seq
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MISAPDVVAFTKEEEYEEEPYNEPPLPEEYSVPLFPFANQGANPWSKLSGAKFTRDFILI
SEFSEQVGPQPLLTIPDDTKVFGTFDLNYFSLRIMSVDYQASFVGHPSGCAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISTDEHKIMQQFQELSAEFSKAS
ECLKKGNRKAFANELEKKLKDLDYTRTVLHTETEIQKKANDKWFYSSQAIEKANELASVE
KSIIEHQDLLKQIRSYPHRKLKASDCYPCEPDCSQDQSADQASTTSKPEEPAETNLYRRR
PSYTPKLIKAKSAKCFDKKLKTLEELCDTEFFTQTLAQLNHIERMFRGDLCYLLTSQIDR
ALLKQQRITNFLFEDLFVLDDKVVEKQDNMPLEYSQDKLHTRSLEDCPIPKVLINVGSFK
SSVESVLIKMEQELGDEFRESEVTESSVYDHQENLDYLDMDMKGSVSSGESIEVLGTEKS
TSVLSKSDSQASLTVPLSPQVVRSKAVSRRTISEDSIEVLSTCPSEALIPDDFKASYPSA
INEEPYVEEPYADDDGAIHFSASVNQQDLGEIEGSSENTLLQTDSTCCIGKESSGFLIPN
SDQTQKHCDEDGVVSIPPQRYREKQQGFHVDFSVDDINSSSQENATEGLSPYDQDPNCLR
SSRDLSKISLNEYGDSTSYISSAASTSSDRTPSPAHHIGLSSERHKKKAGQNALKFIRQY
PFAHPAIYSLLSGRTLIVLGEDEAVVKKLVTALSIFVPNYGKSAKPVKHWVSSPLHIMDF
QKWKLIGLQRVVSPAGVNTLHSLNRYSRYTSILDLDNKTLRCPLYRGTLVPRLADHRTQI
KRGSTYYMHVQSVLTQLCSKAFLYTFCHHLHLPINEKETEQSVVGRQVNFLKLQLGLVNE
DVKVVQYLAELLKLQYIQEPVRPNHSMLRFDYVPSFLYKI
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgatgtggtggcctttaccaaagaggaagaatacgaggaggaaccc
tacaatgagccacccctgccagaggaatactccgttcccctgttcccctttgcaaaccag
ggggctaacccgtggtctaagttgtcaggggccaaatttactcgggatttcattctcatc
tcagagttctctgagcaggtgggaccccagcctttgctgaccattcctgatgataccaaa
gtttttggcacttttgatctcaattacttctccctccggatcatgtctgtggattaccag
gcctcctttgtggggcatccatctggctgtgcctatcccaaactgaactttgtggaagac
tccaaggttgtactgggagattcaaaagaaggagcttttgcttatgtgcaccatctcacc
ctttatgatctggaggccaggggctttgtgaggccattttgcatggcctatatttctact
gatgaacataaaatcatgcaacaattccaagagctctcagctgaattctctaaggcttca
gagtgcttgaagaaaggcaatagaaaagcttttgcaaatgaacttgaaaagaaattgaaa
gatctagattatacccggacagtgctgcacactgaaacagagatccagaaaaaggccaat
gacaagtggttttattcctctcaggccattgagaaggccaatgaactggccagtgtggaa
aaatccattattgaacaccaagacctattaaaacaaatcagatcttatcctcaccgaaaa
ctgaaggcatctgattgctatccatgtgagccagattgttcccaggatcaatcggctgac
caggcatccactacctctaagcctgaagagcctgctgaaacaaatctttatagacgaaga
ccctcatatacccctaagctcatcaaggcaaagtctgctaaatgtttcgacaagaagctg
aaaaccttggaagaactttgtgacactgagtttttcacccagaccctggctcagttaaat
catattgagcgcatgtttagaggagatctgtgctaccttttgaccagccagattgacaga
gcccttttgaaacaacaacgtataactaacttcctctttgaagacttgttcgttttagat
gataaagtagtagagaaacaggataatatgcccttggagtatagtcaggacaagctgcac
accagatctttggaagattgtccaattcctaaagtgttaattaacgtaggatcttttaag
tccagtgtggagtctgtacttatcaaaatggagcaggaacttggagatgaattcagagag
tctgaggtgacagaatctagtgtttatgatcatcaggagaacttggattaccttgacatg
gatatgaaaggaagcgtcagtagtggtgaaagtattgaagttttgggaactgaaaagtct
acttctgttttatctaagtcagacagtcaggcaagcttgactgtcccattgagtcctcag
gtggtccggagcaaagcagtcagtcggaggactattagtgaggacagcattgaggttctt
agcacttgtccctcagaggccttgatccctgatgactttaaggcaagttacccaagtgcc
attaatgaagaaccttatgtggaagagccttatgcagatgatgatggagctattcacttt
agtgcaagtgtcaatcaacaggatcttggtgagatagagggcagttcagaaaatacctta
ttacaaacagattctacttgttgtattggaaaagagagttcaggcttcctcataccaaat
tctgaccaaacacaaaaacactgcgatgaagatggagtggtcagtattcccccacaacgc
tatagggagaagcaacagggatttcatgtggacttctcagtggatgacatcaactcttcc
tcccaggaaaacgcaacagaaggcctttctccttatgaccaagacccaaactgcctgaga
agcagcagggatctcagtaagatcagccttaatgaatatggagattctaccagctacata
agcagtgcagcatccaccagttccgatagaactccttctcctgcccatcacattggcctc
tcttcagagaggcataaaaaaaaggctgggcaaaatgccttaaagttcattaggcagtac
ccctttgcacaccctgcaatctattctctgcttagtgggaggactcttattgtgctaggg
gaagatgaagcagtagtgaagaagcttgtgacagctctttctatctttgttcccaactat
ggcaaatctgccaagcctgtgaaacactgggtctcttcccctttgcacataatggacttt
cagaagtggaaacttattggcttacagagagtggtttctccagctggtgtcaacactctc
cattccctgaaccgctacagccgttataccagcatactagatttggacaacaaaacactt
cgttgcccactctaccgaggcacattggtaccccgtctggcagatcaccgcacccagatc
aaacgggggagcacctattacatgcatgtgcagagtgtcctgacccagctgtgttctaaa
gcctttctctatactttctgtcatcacctacacttgcccatcaatgagaaggagaccgag
cagtctgtggtaggccgacaggtgaacttcttgaagctgcaactgggcctggtcaatgag
gatgtcaaagtggtgcaatatttggctgagctgctcaagctgcagtacatccaagagcct
gttaggcctaatcattcaatgctcaggtttgactatgttcccagctttttgtacaaaatc
tag
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