Gracilinanus agilis (agile gracile opossum): 123233394
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Entry
123233394 CDS
T07702
Symbol
IARS1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
123233394 (IARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gas01007
]
123233394 (IARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gas03016
]
123233394 (IARS1)
Enzymes [BR:
gas01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
123233394 (IARS1)
Amino acid related enzymes [BR:
gas01007
]
Aminoacyl-tRNA synthetase
Class I (U)
123233394 (IARS1)
Transfer RNA biogenesis [BR:
gas03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
123233394 (IARS1)
Prokaryotic type
Other AARSs
123233394 (IARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
123233394
NCBI-ProteinID:
XP_044515731
LinkDB
All DBs
Position
1:2571758..2603062
Genome browser
AA seq
1279 aa
AA seq
DB search
MVQQVPENISFPAEEEKILAFWTSFNCFQECLKQSKHRPRFTFYDGPPFATGLPHYGHIL
AGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVVGMAGNGNVGARPESLWNSSFQEYEIDK
SLGIRGPEDVAKMGIAEYNRQCRGIVMRYSAEWKVTISRLGRWIDFENDYKTLYPQFMET
VWWVFRQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSVFVTFPLEEDETV
SLVAWTTTPWTLPSNLALCVNPDLQYVKLRDATGRVLILMEARLVALYKSESDYVILERF
PGISLKGKRYKPLFEYFVKCKADGAFTVLVDGYVKGEEGTGVVHQAPYFGADDYRVCMDS
NIIQKDSVPVCPVDASGCFTPEVSDFAGQYVKDADKNIIRTVKEKGRLLLAGTFSHNYPF
CWRSDTPLIYKAVPSWFVRVEHMVDKLLENNDHCYWVPEFVREKRFGNWLKDARDWAISR
NRYWGTPIPLWVSDDFEEVVCVGSVAELEDLTGAKLSDLHRESIDHLTIPSRLGKGPLRR
VPEVFDCWFESGSMPYAQVHYPFENKRDFEEAFPADFIAEGIDQTRGWFYTLLVLATALF
GKPPFKNVIANGLILASDGQKMSKRKKNYPDPTAIISRYGADALRLYLINSPVVRAENLR
FKEEGVRDVLKDVLLPWYNAYRFLIQNILRLHKEEQIEFLYNENSVKESSNITDRWILSF
MQSLIGFFEVEMAAYRLYTVVPRLVKFVDTLTNWYVRMNRRRLKGENGTSDCIMALETLF
SILFSLCKLMAPYTPFLTELIYQNLKTLIDPASVREKDTLSIHYLMLPHVRKDLIDQKTE
NAVSRMQSVIELGRVIRDRKTIPIKYPLKEIVVIHQDAEALGDIKSLEKYILEELNVRQV
TLSTDKKKYGIRLRAEPDHMVLGKRLKGAFKTVMAAIKELPSEQLEHLQQTGSLVVEGHE
LHKEDVRLLYTFDQAQGSMSQYEAHSDAQVLVLLDVTPDQSMVDEGMAREVINRIQKLRK
KCNLVPTDDITVYYRAPCQGDYLDTVIQSHTEFILATIKAPLKPYPVSPSDKVLIQEVTQ
LKGSDLEITLTRGVAPPGPACAYVHLNVWANGRERGGVLLLENPKGHHRLDLAKLKGAVG
CIFDLRAPELAVFHEKTEVLSKTDLLSLSGKTLCVTSGCPPAPAQSPGALCGFINLQLLG
AKAQESPVGTLLLENPPGHRHLTYPGLLHEAAKVFGLRSRKLRLFLNEAQTQEITEDVSM
KSLNTKTVYVDVLPTTAEC
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggtccagcaggtcccggaaaacatcagctttcccgctgaggaggaaaagatcttggcc
ttctggaccagctttaattgtttccaggagtgcctgaagcagtctaagcataggccgaga
tttacgttttacgatgggcccccatttgccaccgggcttccccattatggccacatcctt
gctgggaccattaaggacattgtcaccagatacgcccaccagagcggcttccacgtggac
agaagatttggctgggactgccacggcttacctgtggtaggtatggcaggaaatgggaat
gtgggagccagacctgagtctttgtggaactcctcttttcaggaatacgagattgacaag
tccctgggaatcagaggccccgaggatgtggccaagatgggcatcgctgagtacaatcgg
cagtgccgaggcatcgtcatgagatactctgctgagtggaaggtcaccatctccaggctg
ggccgctggatcgactttgagaatgactataagaccctgtatccccagttcatggagact
gtgtggtgggtgttccggcagctctacgacaaaggcctggtgtaccgtggcgtgaaggtg
atgcccttctcgacagcctgcaacacccccctctccaacttcgagtctcaccagaactat
aaggatgtccaagatccctcagtctttgtcactttccctttggaggaagatgaaacggtg
tctctggtggcatggaccaccacaccctggactctgcccagtaacctggccctgtgtgtg
aatcctgacctccagtatgtgaaacttcgagatgcaacaggaagggtcctgatcttgatg
gaagccagactggtggccctgtacaagtcggagagtgactatgtgatccttgagaggttt
cctggcatttccctcaaaggcaagcgctataagccgctgtttgagtattttgttaagtgt
aaagcagatggcgccttcactgtgctcgtggacggctacgtgaagggggaggagggcact
ggcgtggtgcaccaggcaccatactttggagctgacgattaccgcgtctgcatggactcc
aacatcatccagaaagattccgtcccagtgtgtcctgtcgatgcgtccggctgttttacc
cctgaggtctctgacttcgccgggcagtacgtgaaggatgccgataagaacatcatccgg
accgtcaaggagaaaggccgactccttctggcgggcacattcagtcacaactaccctttc
tgctggaggtccgacacgccgctgatatacaaagccgtcccgagctggtttgtcagggtg
gagcacatggtggacaagcttctggagaacaatgaccactgttattgggttcctgagttt
gtgagggaaaagcgctttgggaattggctcaaagatgcccgtgactgggccatctccagg
aacagatactggggcaccccgatccccctgtgggtcagcgatgactttgaagaggtggtc
tgtgtcgggtccgtggcggagctggaagacttgacaggagcgaagctctccgacctgcac
agggagagcattgaccacctgaccatcccttcccgcctggggaagggccccttgcgccgc
gtgcccgaggtctttgactgctggttcgagagcgggagtatgccctatgcccaggtccac
tacccctttgagaacaagcgggactttgaggaagccttccccgccgacttcattgccgaa
ggcatcgaccagacacgcgggtggttctacactctgctggtgctggccactgcactgttt
gggaagcctcccttcaagaatgtcatcgccaacgggctgatcctggccagtgacggccag
aaaatgagcaaacggaagaagaattaccccgaccccacagccatcatcagcagatacgga
gctgatgccctgcggctttacctcatcaactcccctgtggtccgagcagagaacctgcgc
ttcaaagaggagggggtgcgagacgtcctcaaagacgtcctgctcccgtggtacaacgcc
taccgcttcctcattcagaacatccttcggcttcataaggaggagcagatagagttcctc
tataacgagaactctgtgaaggagagcagcaatatcacggaccgatggatcctgtccttc
atgcagtccctcatcggcttctttgaggttgagatggcagcataccggctatacactgtg
gtgccacggctagtcaagtttgtggacacgcttaccaactggtatgtccgaatgaatcgc
cgacggctcaagggcgagaatgggaccagcgattgcatcatggccctcgaaactttattc
agcattctcttctccctgtgcaagctgatggccccctacacccccttcctcactgagctg
atataccagaacctgaagaccctcattgacccagcttcagtccgggagaaggacacgctg
agcattcactacctcatgctcccccacgtccgaaaggatctgattgaccagaagacggag
aacgccgtctccaggatgcagtccgtcattgagctgggccgagtcatccgtgaccggaag
accattccaatcaagtatcctctgaaggagattgtggtcatccaccaagatgctgaagcc
ctcggcgacatcaagtctctggagaaatacatcctcgaggagctgaacgtccggcaggtg
accttgtctacggataaaaagaagtatggcatccggctgcgagcagagcccgaccacatg
gtgctgggcaagcgcctcaaaggggccttcaagactgtgatggcggccatcaaggagctt
cccagcgagcagctcgagcacctacagcagacagggtctctcgtggtggaggggcacgag
ctccacaaggaagatgtccgcctcctgtacacctttgaccaggcccaagggagcatgtcc
caatacgaggcgcactcggatgctcaggttctggtgctgctcgatgtcaccccggatcag
agcatggtcgacgaaggcatggcccgggaagtcatcaaccgtatccagaaactccgaaag
aagtgcaatctggtgcccacggatgacatcactgtgtactacagggcgccctgccaggga
gactacctggacacggtcatccagagtcacacggagttcatcctggccaccatcaaggct
ccgctcaagccctacccggtgtcaccgtcagacaaagtgctcattcaggaggtgacccag
ttaaagggctccgacttggaaatcaccctcacgcgaggtgtggccccgccgggtccagcg
tgcgcgtacgtccatctgaacgtctgggccaatggcagagagcgaggcggcgtcctgctc
ctcgagaatcccaagggccatcaccggctggacctggccaagctcaagggcgccgtcggc
tgcatctttgacctgcgagctcccgagctggccgtcttccatgagaaaacagaagtcctc
agtaagacggatctgctgagcctcagcgggaagaccctgtgcgtgacgtccggctgtccc
ccggctccggcccagagccctggcgccctctgcggcttcatcaacctgcagctgttgggt
gccaaggcacaagagagcccggtgggcacgctgctgctggagaacccgccgggccaccgg
cacctgacctacccgggcctgctccacgaggccgccaaggtgttcggcctgcgcagccgc
aagctcaggctcttcctcaacgaggcccagacgcaggaaatcacggaggacgtctccatg
aagtctctgaacacaaagacggtgtacgtggacgtgctgcccaccacggccgagtgctga
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integrated database retrieval system
