Gracilinanus agilis (agile gracile opossum): 123234430
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Entry
123234430 CDS
T07702
Symbol
PCDH15
Name
(RefSeq) protocadherin-15
KO
K16500
protocadherin-15
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
123234430 (PCDH15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gas03037
]
123234430 (PCDH15)
04515 Cell adhesion molecules [BR:
gas04515
]
123234430 (PCDH15)
Cilium and associated proteins [BR:
gas03037
]
Primary cilia and associated proteins
USH complex and associated proteins
123234430 (PCDH15)
Cell adhesion molecules [BR:
gas04515
]
Cadherins
Protocadherins
123234430 (PCDH15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
PCDH15_12th
ECD
Ig_CLSTN
Cadherin_FAT4_N
Ig_Cad99C_N
Cadherin_CELSR2_9th
CDH23_a-b
Motif
Other DBs
NCBI-GeneID:
123234430
NCBI-ProteinID:
XP_044516266
LinkDB
All DBs
Position
2:715004500..715665460
Genome browser
AA seq
1735 aa
AA seq
DB search
MNCKGQDRVFVVGSVTSWVYRPLLATSKCQNSSLMIEVEIRNNNRSFEYEDSQGNLQIAT
TKSRGTIIVDNMLIKGTAGGPNPTIELSLKDNTDYWVMLDPVKQMLFLNSTGRVLDRDLT
PVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPDDPTSNDTFEIPLMLTGTVVLRKRL
NYEDKTRYYVIVQANDRAHNLNERRTSTTTLTIDVLDGDDLGPMFLPCVLVPNTRDCRPL
TYQAAIPELETPEELNPIIVTPPIQAIDQDRDIQPPSDRPGILFSILVGTPEEYPQYFHM
HPRTAELSLLQPVNRDFYQKFDLVIKAEQDNGHPLPAFASLHIEILDVNNQSPYFTMPSY
QGYILESAPVGATISDNLNLTTPLRIVVLDKDVEDVPEGGIPTKDPEVHLFLNDYTSVFT
VTPSGITRYLTLLQPVDREEQQYYTFLMTAFDGVQESSPVTVNIKVIDANDNTPTFPAIS
YDVYVYTDMSPGDSVIQLTAVDADEGSNGEITYSILVGDKGDFVINKTTGLVTIAPGVEL
TVGHTYALTVQAADNAPPEERRDSICTVYIEVLPPNNQSPPRFPQLMYTREVSEALRIGA
VLLNLQVCQVGPELGRETREMEIPTEASLLLGFYSFQEQEGSRKRSTGILTLAKALDRES
TDRYILIVTAHDGRPDGTSTATVNIVVTDVNDNAPTFDPYLPRNLSVIEEEANAYVGQVR
ATDPDAGINGQVHYSLRNFNNLFWISSNGTIYTRVKLNREVRDYYELVVVATDGAVHPRY
STLTLAIRVLDIDDNSPVFTNSTYTVVVEENLPVGTTFLQIEATDVDLGAIVSYRIRSPE
VKHLFALHPFTGELSLLESLDYESFPENEAYITFLVEAFDIGGTMPPGIATVMVIVKDMN
DFPPVFSKPLYKGMVAPDAVKGTLITTVFATDADPPGLPASHVRYRVEDRQYPYPASIFD
VEEDTGRVITRVNLNEEPTTIFKLEVVAFDDGEPVMSGSATVKILVLHPGEIPRFTQEEY
RPPPVSELAPIGTPVGVINAAAINQSIVYSIVSGNEDGNSAKVYIEVQDENDHAPVFQKK
LYIGGVSEEALMFSSVLRVKATDKDTGNYSAMAYRLIIPPIKEGKEGFVVETYTGLIKTA
MLFKNMRRSYFKFQAVATDDYGKGLSGKANVLVSVVNQLDMQVIVSNVPPTLVEQNIEEL
TEILDRYVQEQIPGAKVVVESISARRFGEAYSLEDYTKSDLVVYAIDPQTNRAISRNELF
KFLDGKMLDINKDFQPYYGEGGRILEIRTPDAVALVKKHGQSFGYTEGALLALAMIIILC
CIPAILVVLVSYRQFKIRQEECTKTAKMQALAAPKPAAPAPPPAAAAPPPPPPPAPPGGP
HLYEELGGSAMHQYEMPEYGSRRRLLPPAGEEYGEVAGEAEEEYYPEEEERKPKKPIPEV
IEPGVEEVEVEVPVIIEGPTAAETARVAWKRAKIFPMIYKKVCELAGEDEEWRRELGLED
RDYLTLRLEPDEATESTVESESSEESSEYSDYSDESEWSTYESTTSEEESESETPSEVVE
SSTPESESESTESEGEKARKNIVVGRRIIPPEELIPKPKKRRKESSEEESEEEKMEEAEP
TEGEESELAGPEDTTDAEAQELEGGKRTGSTEGSKASGEESESSGSRSSSSEGQMGAEGY
VTPNPPGKPRIQRAPAAVEEGEEGSLAEGVEGPPAEGAEAPPAKGKEAEGYNTAL
NT seq
5208 nt
NT seq
+upstream
nt +downstream
nt
atgaactgcaaaggacaagacagagtctttgtggttggctcagtgacttcctgggtctac
agaccccttttagccactagcaaatgtcaaaactcttctttgatgattgaagtggaaatc
aggaacaacaacaggtcttttgagtatgaagatagccagggaaacctccagatagccacg
actaaatccagaggtacaatcatcgtggacaacatgctcatcaaagggacagctggggga
cccaatcctaccattgaactctcattaaaggacaacacggattactgggtgatgttggat
ccagtcaaacagatgcttttcctaaatagcaccggcagagtcctggacagagatctcaca
ccagtaggaactaccatattcacagggttttctggagataatggagctacagacatagat
gatggccccaatggacagatagaatatgtcatccagtacaatccagatgatccgacctcc
aatgatacctttgagatccctctaatgttgactggaacagttgtattgaggaagagactt
aattatgaagataagacccgttattatgtcatcgttcaagctaacgacagagctcataat
ctcaatgaacggagaacaagtactaccacacttacgatagatgtccttgatggagatgat
ttgggtccaatgtttcttccttgtgtcctggtgcccaatactcgagactgtcgtcctctc
acctaccaagcggccataccagaactggaaacaccggaagaactgaaccccatcattgtc
actcccccaatccaagccattgatcaggaccgggacatccaaccaccttctgatcgccct
gggatcctcttttccatccttgtgggaactccggaagaatatccccagtatttccatatg
catccaaggaccgcagagctcagcctcctgcagcctgtaaacagggatttctaccagaaa
tttgatttggtgattaaggcagaacaagataatggtcatcctcttcctgcatttgccagc
cttcatattgaaatcttggatgtaaacaaccagagcccttacttcacaatgcccagttat
caaggctatatcttggagtctgcccctgttggtgcaaccatctcagacaatctcaacttg
accacccctctcagaatcgttgtcttggacaaggatgtagaagatgttccagaaggtggc
attcctacaaaagaccctgaagtccatctttttctgaacgactacacttcagtcttcact
gtgactccatctggtataacacgttacctcaccttgcttcagcctgtggacagggaagaa
cagcagtattacaccttcttgatgactgcatttgatggtgtccaagaaagcagccctgtt
acagtgaacatcaaggtgatcgatgcgaatgacaacactccaaccttccctgcaatctcc
tatgatgtttatgtttacacagacatgagtcctggagacagcgtcatacagctcactgca
gtagatgcagacgaagggtcaaatggggagatcacgtacagcatcctcgttggggataaa
ggagacttcgtcatcaataaaaccacaggtcttgttactatcgcaccaggagtagaattg
acagtagggcacacctatgccctcacagtgcaagcagctgacaatgccccaccagaagaa
agaagggattccatttgcactgtctatattgaagtacttcctccaaataaccagagccct
cctcgcttcccacagctaatgtacacacgtgaagtaagcgaagccttgaggattggggca
gttttgttgaatctccaggtgtgccaagttggccctgaattgggccgggagacgagagaa
atggaaatccccacagaagcctctctacttctgggattctatagcttccaggagcaagag
ggaagcaggaagaggagcactggaattctaactttggcaaaagcactggacagagaaagc
acagaccgctacattttgatagtgactgcacatgatggcagaccagatgggacttcaaca
gccactgtgaacattgtagtgacagatgtaaatgacaacgctccaacttttgatccctat
ctgccaagaaacttatctgtgattgaagaagaagccaatgcttatgtcggacaagtcagg
gccacagatccagatgctggtataaatggtcaggtacattatagtctcagaaatttcaac
aatcttttttggatctcttccaatgggactatttacacaagagtcaagctcaaccgggaa
gtaagagattactatgagctcgttgttgtggcaacagatggagctgtgcatcctcggtat
tctactttaactttggccataagggtcttggatattgatgacaatagccctgttttcacc
aattctacctacacagttgttgttgaagagaatcttccagtgggaaccaccttccttcaa
atagaggcaactgatgttgaccttggtgccattgtttcctaccggattcgaagcccagaa
gtgaaacatttatttgccctgcatcctttcacaggagaattgtctcttttggagagtttg
gattatgagtcatttccagagaatgaagcctacatcacttttcttgtggaggcttttgat
attggaggaaccatgcccccaggcattgccactgtcatggtgatagtaaaggatatgaac
gattttcctcctgtgttttccaagcccctctacaaagggatggtcgctccagatgcagtc
aagggcacgttgatcacgactgtttttgctacagatgctgatcctccggggttaccagca
agccatgtacggtaccgagtggaagatagacaatacccttacccagcgagcatatttgat
gtagaagaagatacaggacgggtcatcactcgagtgaatctcaatgaagaaccaactaca
atatttaagttggaagttgttgcttttgatgatggggaacctgtgatgtctggaagtgct
acagtgaaaatcctcgtcttgcatcctggagaaatcccacgcttcacacaagaagaatat
agaccacctccagtaagtgaacttgcacccattgggactccagttggcgttatcaacgca
gcagccatcaatcagagtatcgtctattctattgtttctggaaatgaagacggcaactca
gccaaggtgtacattgaggttcaggatgagaacgatcatgctccggtctttcagaaaaag
ttgtacattggaggagtgtctgaagaagccctgatgttttcctctgtgctcagagtgaag
gcaactgataaagatactggtaattatagtgccatggcatacagacttatcattcctcca
attaaagaggggaaggaaggatttgttgtggagacatacacaggtcttataaaaactgcc
atgctgttcaaaaacatgagaaggtcctacttcaagttccaggctgttgcaacggatgat
tacgggaaagggctgagtggcaaagctaatgtcctggtatcggtagtcaatcaactagac
atgcaagtcattgtttccaatgtgcctccaacacttgtggagcagaacatcgaagaactg
acagagattttggatcgttatgtgcaagaacagattcctggtgccaaagttgtggtggaa
tccatcagtgcccgacggtttggagaagcctattctctagaagactataccaagtctgac
ctggttgtctatgcaattgacccccagactaacagagcaatcagcagaaatgaacttttt
aagtttctagatggaaaaatgctagatattaataaagacttccagccatattatggcgaa
ggaggacgaattttggaaatccgcacaccggatgcagtggcattggttaagaaacatggg
cagtcttttggctatacggaaggggccctgcttgctctagccatgattattatcctttgc
tgtattcctgccatcttggtcgtattggtcagctacagacagtttaaaatacgacaagaa
gaatgcaccaagacagctaagatgcaggccttggcagcgcccaagccagcagccccagca
ccaccaccggcagcagcagcacctccaccaccaccaccaccagctcccccagggggtccc
catctctatgaggagctgggtggcagcgcaatgcatcagtatgaaatgcccgaatatgga
agtcgtcgccggctactgcctcctgctggtgaggagtatggagaagtggcaggagaagct
gaagaagaatactacccagaagaggaggaaaggaaacctaagaaacccataccagaagtt
atagagcctggtgtggaggaggtcgaggttgaggtccctgtgatcattgagggaccaaca
gcagcagagactgcccgtgtggcatggaagagagctaagatattccccatgatatataag
aaagtctgtgagttggcaggagaggatgaagaatggcggagggagcttggcttagaagac
agagattacctgaccctgcgactggagccagatgaagctacagagagcactgtggaatcg
gagtccagtgaggaatctagtgagtacagtgactacagtgatgaatctgagtggagcacc
tatgagagcacaacttctgaagaggagtcagaatcagagaccccatcagaagtagtggag
agctctacccctgagtccgagtcggaatccacagaatcagaaggtgaaaaggcgaggaag
aacattgtggttggccggaggataattcctccagaggaattgatccccaaacctaagaaa
cgcagaaaggagtcatcggaagaggaatctgaggaagagaagatggaagaagcagaacca
actgaaggagaagaaagtgagctcgctggacctgaagatactacagatgcagaagcgcag
gaactagaaggtggtaaaagaactggatcaacagaaggaagtaaggccagcggggaagag
tccgagtccagtggtagtaggagtagcagtagtgaaggccagatgggggctgaaggctat
gtcacacccaatcctccagggaagccaagaatacagagggccccagcagcagtagaagag
ggagaagaaggctccttggcagagggagtagagggccccccagcagagggagcagaggcc
cctccagcaaaaggcaaagaagccgaaggttacaacacagcactgtaa
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integrated database retrieval system
