Gracilinanus agilis (agile gracile opossum): 123236599
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Entry
123236599 CDS
T07702
Symbol
PCDHGC4
Name
(RefSeq) protocadherin gamma-C4
KO
K16497
protocadherin gamma subfamily C
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gas04515
]
123236599 (PCDHGC4)
Cell adhesion molecules [BR:
gas04515
]
Cadherins
Protocadherins
123236599 (PCDHGC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
123236599
NCBI-ProteinID:
XP_044518921
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All DBs
Position
2:complement(401689028..401692784)
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AA seq
995 aa
AA seq
DB search
MRHGVKIWAGIRPGACLLFFCQLGYISGQIRYPVPEESKEGTFVGNIAQDFLLDAESLSA
RRLQVAGEANQRYFRVDLDSGALLVKDPIDREALCGLSASCVVPLEFVTEGPLEMYRAEV
EIVDVNDHSPRFPRQQLDLEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLSPNDYFALD
VKKRSDGSLVPELLLEKPLDREKQSDYRLVLTAVDGGSPPRSGTAELKVSVLDVNDNAPA
FEQSSYRISVLESAPAGTLLVQLNATDPDQGSSGNITFSFSNHTPERVRALFGLHSITGQ
LTLRGPLDFETDNYYEFDVRARDGGTPAMEQHCSLRVDVLDVNDNAPQITLTSELGTLRE
SAEPGTVVALISVQDPDSGPNGDVSLRIPEHLPFALKSAFKNQFSLVTAAALDREVESKY
EIPVTASDAGSPPLSTRRTIFLNVSDVNDNPPSFIQRSHEVFVQENNRPGDLLCSLAASD
PDSGLNALISYSLLEPRGRDVLASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRG
DPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGSLCPQALPPSVGAGHLVTKVTAVDLDSG
YNAWVSYQLLEAPDPSLFAVSRYAGEIRTAVPIPADLPPQKLVIVVKDNGSPPLSTSVTL
LVSLEEDSHPALPDLREHSAKPQGESRLTLYLAVSLVAICFVSFGSFVALLSKCLRGTAC
GLRCLGGTCSCLSRSRRREGLPPSNGILRIQLGSEDPIKFVDVGGHSHGCTPLASAPSRS
DSFMMVKSPSAPLAGEPVRPSCPPSDLLYGLEVRPTAMLPLDQAAPLGWPGPTHGASRQS
SEDLTPNARANADESSFSEHQQWGRPCALDDFTTYPLSFVALALGSELNQYRRAGDKVEM
DLSVVSLLQKGVQRQGGEEGDGVGGAVIQIFDWGPSSGLSWETQVSSSVQRQVLYLVQAK
LSKRLKSRTKPLKRNNEEFCNQFSFQTRGFPASTI
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgcgccacggggttaagatctgggctggaatccggccgggggcttgccttttgttcttt
tgccagctaggttacatttccgggcagatccgctacccagtccccgaggaatcgaaggag
gggacctttgtggggaatattgcccaggatttcctgctggatgccgaaagcctgtcggct
cgtcggttgcaggtcgctggcgaggcgaaccagaggtacttccgcgtggatctggacagc
ggagccctgcttgtcaaggatcccatcgatcgagaggctctgtgcgggctcagtgccagc
tgcgttgtgccgctggagtttgtgactgaggggcccttggagatgtaccgggcagaggtg
gagatcgtggatgtgaatgaccattctcctcgattccctaggcagcagctagacctggag
attggggaggcggcaccccccgggcagcgtttccccctagagaaggctcaggacgcagac
gtggggagtaactccatcagcagctacaggctgagtcccaatgactacttcgccctagac
gtgaagaagcgcagtgacggcagtctcgtcccagagctgctgctggaaaaacctttggac
agggagaagcaatcggactaccgtctggtgctgactgccgtcgatgggggcagccctcca
aggtcaggcaccgcagaactcaaggtatctgtattggacgtaaatgacaacgccccagct
ttcgagcagtcttcttacagaatcagtgtgcttgagagtgcaccagcgggcactttactc
gtccagctcaacgccactgaccccgaccagggttccagcgggaacatcactttttccttc
agcaatcataccccagaacgagtacgggctctctttggcctgcactctatcacggggcaa
ctcacactccggggtcccctagattttgagactgacaactactacgaatttgacgtgagg
gctagggatggggggacgccagccatggagcagcactgcagtctccgcgtggatgtattg
gacgtgaatgacaacgccccacagatcacgctgacctcggaactgggtacccttcgcgag
agtgctgaacctggcactgtggtggcactcattagcgtacaagacccagattctgggcct
aatggtgatgtgagcctccgtatcccagaacacctgccctttgctctcaagtcagccttc
aagaaccaattctccctggtgactgctgctgccctggatcgagaggtggaatccaaatat
gagattccagttactgcctctgatgcgggctctccgcctctgagcacacgcaggacgatt
ttccttaatgtttccgacgtgaatgataacccaccttcattcattcagagatcccatgag
gtcttcgtccaggagaacaatcgccctggggatctgctgtgctctctggcagcctcggat
ccagattcgggtttgaatgcgctcatctcttattcccttctggagcccagaggtcgggat
gtcttggcttcctccttcatctccctcaatcctcagaccggagcagttcacgccaccagg
tccttcgactacgagcaaactcagacgctgcagttcgaagtacaggcccgagatcggggc
gacccacctctcagcagcacggtgacagttcgcctcttcgtgctagatctcaatgacaat
gcccctgcggtgctccgtcccagggctaggccaggctctctgtgcccacaggcactaccc
ccatcagtgggagctggccatcttgtaaccaaggtgactgcggtggacttggattcagga
tataatgcctgggtctcctatcaacttctcgaggccccggatcctagcctatttgctgtg
tctcgctatgcaggcgagattcggacagcagtcccaatcccagctgaccttccgccccag
aagctggttatagtagtgaaggacaatgggagtcctccactctccacctccgtgacactg
ctggtatctctggaggaagattcacacccagctcttcctgacctccgggagcactcagcg
aagccccaaggagagtctcgcttgaccctctaccttgcagtatccctggtagcgatctgc
tttgtctctttcggctctttcgtggcactgctctccaagtgcctgcgaggtacagcttgc
ggcctgcgatgccttggcgggacctgctcctgtctcagtcggtcccgaaggagggagggg
ctcccaccttccaatggcatcctccgaatccagttgggttcggaagatcccatcaaattt
gtggacgtgggcggtcactctcatggttgcacacccttggcttcagcaccctctcggagc
gatagcttcatgatggtgaaatcaccgagtgcacctctggcaggggagcctgtccgccca
agctgcccgccttccgatctgctctacggactggaggtgagacccacagccatgctgccc
ctggatcaggcagcgcctttgggctggcctggccccacgcatggggcttcgaggcagtcc
agcgaggatctgacccccaacgccagggccaatgctgatgagtcatcattttcagaacac
cagcagtggggtaggccctgtgctttagatgattttacaacatatccattgagttttgtg
gcgttagcactggggagtgagctgaaccaatatcggagagcaggagataaagtggagatg
gacctttctgtggtttctttgctccaaaaaggtgtgcagagacaaggtggtgaggagggt
gatggggttgggggggcagtgatccagatctttgactggggccccagcagcgggctcagc
tgggagacccaggtttcgtcttccgtacaaaggcaagttttgtatctggttcaggcgaag
ctgtcgaagcgcctgaaatcccgcacgaagcctctgaagcggaacaatgaggagttttgt
aaccagttcagcttccaaacccgcggcttcccagcgagcaccatctga
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