Gracilinanus agilis (agile gracile opossum): 123242434
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Entry
123242434 CDS
T07702
Symbol
LDLR
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03272
Virion - Hepatitis viruses
gas04144
Endocytosis
gas04913
Ovarian steroidogenesis
gas04925
Aldosterone synthesis and secretion
gas04927
Cortisol synthesis and secretion
gas04934
Cushing syndrome
gas04976
Bile secretion
gas04979
Cholesterol metabolism
gas05145
Toxoplasmosis
gas05160
Hepatitis C
gas05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
123242434 (LDLR)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123242434 (LDLR)
09150 Organismal Systems
09152 Endocrine system
04913 Ovarian steroidogenesis
123242434 (LDLR)
04925 Aldosterone synthesis and secretion
123242434 (LDLR)
04927 Cortisol synthesis and secretion
123242434 (LDLR)
09154 Digestive system
04976 Bile secretion
123242434 (LDLR)
04979 Cholesterol metabolism
123242434 (LDLR)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
123242434 (LDLR)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
123242434 (LDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
123242434 (LDLR)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
123242434 (LDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gas04131
]
123242434 (LDLR)
Membrane trafficking [BR:
gas04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
123242434 (LDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
SGL
EGF_CA
Vgb_lyase
EGF
EGF_LRP2
Psg1
Motif
Other DBs
NCBI-GeneID:
123242434
NCBI-ProteinID:
XP_044526123
LinkDB
All DBs
Position
1:709434238..709473749
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AA seq
906 aa
AA seq
DB search
MHFPYRRAKSRLGFLTKFKVLLEPTVGLGHNRSRGXDSKPRGAEGSMKGLGSLDVLLCSG
IVIILTLSTATNAMDTCGRNEFQCQDGKCISYKWVCDGSPECKDGSDETMETCSSVTCKP
EEFSCGGRINRCIPLTWKCDSQTDCENGSDEQDCPLKTCSHDQFRCHDGKCISQEFVCDA
DRDCDDGSDELDCPDPTCNPATFQCNNTICIPKLWVCDGDQDCEDGSDEQPDKCGGHDLV
KKPWPCSSLEFHCGSGECIHMSWRCDGGHDCKDKSDEEGCVKATCRPDEFQCNDGECVHG
SRQCNKEYDCKDMSDEIGCVNVTLCEGPNKFKCHSGECITMDKVCNGPRDCRDWSDEPIK
ECGTNECLNNKGGCSHICNDLKIGYECLCPEGFRLVDQKRCEDIDECQNPDTCSQFCVNL
PGSYKCECYEGYQTDPITKTCKAIGTIAYLFFTNRHEVRKMTLDRSEYISLIPNLKNVVA
LDMEVASNKIYWSDLSQKKIYSSEIDSAHSFSTHDTVISGDIQAPDGIAVDWIHGNLYWT
DSVLGTISVANTKGSKRKTLFKQEGAKPRAIVVDPVHGFMYWTDWGTPAKIGKGGLNGVD
SFPLVTEEIQWPNGITLDLSSDRLYWVDSKLHSISSVDVNGGNRRIVLEDKNKLAHPFSL
AIFEDKVFWTDIINEAIFSANRLTGSDIILVAEDLLSPEDIVLYHNLTQPTGVNWCEKTS
LSNGGCQYLCLPAPQINSHSPKFTCACPDGMHLAADMRRCTKEAIVPVTSSKPIATKEPK
MTTLSGLITTITRKPTIKYGTPDLTTAEMVTMSQKAVLNQVGIQESQEHHNGPTALSIVL
PIVLLILIAFGAFLVWKNWRLKNINSINFDNPVYQKTTEDEVHICRSQDGYTYPSRQIVS
LEDDIA
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcccataccgacgtgctaagtcacgcctgggtttcctcacaaaatttaaagtc
cttttagaaccaacagttggcctcggacacaatagaagccgggggnaagatagcaagccc
agaggtgcggaaggaagcatgaaaggcttaggatctttagatgtattgctgtgttccgga
atcgttatcattctgactctatcgaccgcaacgaatgcaatggacacgtgtgggaggaat
gaattccagtgccaagatggaaagtgcatctcctataagtgggtctgcgacggtagtcct
gagtgcaaggatggatctgatgaaaccatggaaacctgctcatctgtgacctgcaagcca
gaagagttcagctgtggtggtcgaattaatcggtgcatccccttaacctggaagtgtgac
tcccaaacggactgtgagaatggctcagatgagcaagactgcccccttaagacatgttcc
cacgaccagttccgatgccatgatgggaaatgcatctcccaagagtttgtctgtgacgca
gaccgggactgtgatgatgggagtgatgagctagattgtccagaccccacctgcaatcca
gcaacattccagtgcaacaatactatatgtatccccaaactatgggtctgcgatggtgac
caggactgtgaagatggctccgacgaacagcctgacaagtgtgggggacatgacttggtc
aagaagccctggccttgctcttctctggagttccactgtggcagtggggagtgcatccac
atgagttggcggtgcgacgggggtcatgactgcaaggacaagtctgatgaggagggctgt
gtcaaagccacttgccgccctgatgagtttcagtgcaatgatggggaatgtgtccacggg
agccggcaatgcaacaaggaatatgattgcaaggatatgagtgatgagatcggctgtgtc
aatgtaacactgtgtgaaggcccgaacaaatttaaatgccacagtggagagtgcatcact
atggacaaagtgtgtaatggacccagagactgccgggactggtctgatgagccaatcaag
gaatgcggaaccaatgaatgtctgaacaacaaaggcggctgctctcatatatgcaacgac
ctcaaaatagggtatgaatgcctgtgccctgaaggcttccgacttgttgaccagaaaaga
tgcgaagatatcgatgaatgccagaacccagacacttgcagccaattttgcgtgaatctc
ccgggaagttacaagtgtgaatgttatgaaggctaccagactgacccaatcactaagacc
tgcaaggccatcggcaccattgcctatctctttttcaccaaccgccacgaagtgaggaag
atgactttggaccgaagtgaatacatcagtctcattccaaatctgaaaaatgtagtagcc
ttggacatggaagtggccagtaataagatctattggtctgatctgtcacagaagaagatc
tatagctctgaaattgacagtgcccatagtttctccactcatgatactgtgatcagtgga
gatatccaggctccagatggcatcgcagttgactggatccatgggaatctctactggaca
gattctgtccttggcaccatttctgtggccaatactaagggctccaagaggaagacactt
ttcaagcaggaaggtgctaaaccccgggccatcgtggtagatccagttcatggcttcatg
tattggacagactggggaacccctgctaagattgggaaaggtggtctgaatggagttgac
agcttccccctggtgacagaagagatacaatggcccaatggaatcactcttgatctttcc
agtgatcgtctctactgggttgactccaagcttcactccatctccagtgtggatgtcaat
ggtggaaacaggaggatagtgttagaggataaaaacaaacttgcacacccattttccctg
gcaatttttgaggataaggtcttctggacagacattataaatgaagccattttcagtgca
aatcgcctcacaggatctgatatcattttggtggcagaagatctgttgtctcctgaggac
attgtcctctatcacaacctcacccagcctacaggggtgaactggtgtgagaagacttct
ctctccaatggtggctgccagtatctgtgccttccagccccacaaatcaactctcactcc
cccaaattcacctgtgcctgtcctgatggcatgcacctcgctgcagatatgagaaggtgt
accaaagaagcaatcgtacctgttacgtcttccaagcccattgcaacaaaggagcctaaa
atgactactctttctggcttaataacaaccattacacgaaagccaaccatcaagtatggc
actcctgacctcacgacggcagaaatggttacaatgtcccaaaaagcagtactgaatcaa
gtgggcatacaagagagtcaagagcaccataatggacccaccgctttatccatcgtttta
ccaatagttctgctcattttgattgcctttggagcattcctggtatggaagaactggagg
ctcaagaacatcaacagcataaactttgataatcccgtttatcaaaagacaacagaggat
gaagttcacatctgtaggagtcaagatggctacacgtatccctcgagacagatagtgagc
ctggaagatgatattgcatga
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