Gracilinanus agilis (agile gracile opossum): 123243715
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Entry
123243715 CDS
T07702
Symbol
DHX9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gas03041
]
123243715 (DHX9)
03012 Translation factors [BR:
gas03012
]
123243715 (DHX9)
Enzymes [BR:
gas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
123243715 (DHX9)
5.6.2.6 RNA 3'-5' helicase
123243715 (DHX9)
Spliceosome [BR:
gas03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123243715 (DHX9)
Translation factors [BR:
gas03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
123243715 (DHX9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
ResIII
AAA_19
nSTAND3
ATPase
AAA_22
PTCRA
AAA_14
PhoH
T2SSE
XRN1_D1
Motif
Other DBs
NCBI-GeneID:
123243715
NCBI-ProteinID:
XP_044527703
LinkDB
All DBs
Position
4:78842125..78883102
Genome browser
AA seq
1254 aa
AA seq
DB search
MGDVKNFLYAWCGKRKMTPTYEIRAVGNKNRQKFMCEVRVEGFNYTGMGNSTNKKDAQSN
AARDFVNYLVRVNEVKSEEVPAIGIAPPVTDTSDSAEGGGNLPTTLGGPLPPHLALQAGK
GSALGGSGYGPGAGPGGTWDRGANLKDYYSRKEEQEAQATLESEEVDLNAGLHGNWTLEN
AKARLNQFFQKEKVQGEYKYTQVGPDHNRSFIAEMTIYVKQLGRRIFAREHGSNKKLAAQ
SCALSLVRQLYHLGVVEAYSGLTKKKEGETVEPYTVNLSQDLEHQLQNVVQELCLEIQPP
PEDPTFPVILNIGKLATFEPAQRQNQVGVVPWSPPQSNWNPWTSSNIDEGPLAYATPEQI
SMDLKNELMYQLEQDHDLQAILQEREMLPVKKFENEILRAIHQNSVVIIRGATGCGKTTQ
VPQYILDECIQNNRAAECNIVVTQPRRISAVSVAERVSYERGEEPGKSCGYSVRFESVLP
RPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIV
LMSATIDTSMFCEYFFNCPIIEVFGRTYPVQEYFLEDCIQMTQFIPPPKDKKKKDKDDDG
GDDDDANCNLICSDEYGPETKRCMAQMNEKETPFELIEALLKYIETLNVPGAVLVFLPGW
NLIYTMQKHLEMNPHFGSHRYRILPLHSQIPREEQRKVFDPVPTGVTKVILSTNIAETSI
TINDVVYVVDSCKQKVKLFTAHNNMTNYATVWASRTNLEQRKGRAGRVRPGFCFHLCSRA
RYDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELD
ALDANDELTPLGRILAKLPIEPRLGKMMIMGCIFYVGDAVCTISAATCFPEPFISEGKRL
GYVHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQL
KEILVNSGFPEECLMTQVFNNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNA
LIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSDGE
IVLVDDWIRLQMSHEAAACITALRAAMEALVVEVTKEPEIISNLDPSNERMLNMIRQISR
PSAAGISLMIGNARYGDGPRPPKMARYDNGGGFRGRGGQRGSGYQGGYGGRGYGGSNSYQ
GGYGSGGGYRGSGGGYRGSGGGYSGGMGGGGYRGSGGFPRGNRGGYGMGFGGGF
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgtcaaaaatttcctgtatgcctggtgtggaaaaaggaaaatgaccccaact
tatgaaataagagcagtggggaacaagaatagacagaaattcatgtgtgaggtccgagtg
gaaggttttaattatactggtatgggcaattccacgaataagaaagatgctcaaagtaat
gctgccagagactttgttaactacttagttcgagtgaatgaagttaagagtgaggaagtt
ccagccattggaatagcacccccagttactgatacatctgactcagcagaaggtggtgga
aatttaccaacaactttgggaggacctcttcctcctcatctggctctccaagcaggtaag
ggttctgcacttggaggctctggttatggtcctggtgctggtcctggtggtacatgggac
cgaggagcgaacttaaaggattactactccagaaaggaggagcaagaagcacaagcgact
ctggaatcagaagaagtggatttaaatgctggtcttcatggaaactggaccttggaaaat
gccaaggctcgactgaaccagtttttccaaaaagagaaggtccaaggagaatataaatac
acccaagtgggtcctgatcacaacaggagctttattgcagaaatgaccatttatgtcaag
cagctgggcagaaggatttttgcacgtgaacatggttcaaataaaaagctggcagcacag
tcttgtgcactgtcccttgtcaggcagctctaccatcttggagtggttgaagcttactct
ggactgacaaagaagaaggaaggggagacggtggaaccttacacagttaacctatctcaa
gacttagaacatcagctacaaaatgttgttcaggaattgtgcctagaaatccagccccca
cctgaagatcctacttttccagttatactcaatattggcaaactagccacttttgaacca
gcacaacgccagaaccaagttggggttgttccctggtcccctcctcagtctaactggaat
ccgtggaccagtagcaacattgatgaaggtcctttggcttatgccactcctgaacaaata
agcatggacctgaaaaatgaactcatgtaccagctggaacaggatcatgatttacaggca
atcctgcaggagagagaaatgctgcctgttaagaagtttgagaatgaaatcttgagggca
atccatcaaaattcagttgtcattattcgtggtgccactggatgtggtaaaactacccag
gttcctcagtatattctggatgaatgtattcaaaacaaccgtgcagctgaatgtaacata
gtagtgactcagcccaggagaatcagtgcagtttctgtggcagaaagagtttcttatgag
agaggagaagaacctgggaaaagctgtggctacagtgtacgctttgagtctgtgcttccc
cggcctcatgccagtattatgttctgtactgtaggtgttctgctgaggaaactagaagct
ggcattcgtggaatcagtcatgtaattgtggatgaaatccatgaaagagatattaatact
gactttcttttggtggtgctaagggatgtagtacaggcttatcctgaagtccgcattgtc
cttatgtctgccaccattgataccagcatgttctgtgaatatttcttcaattgtcctatc
attgaagtttttggaagaacttacccagttcaagagtattttctggaagactgtattcag
atgactcagttcattcctccaccaaaggataagaagaaaaaggacaaagatgatgatggt
ggtgatgatgatgatgcaaactgtaacttaatctgcagtgatgaatatggtccagaaaca
aagcgttgcatggcacagatgaatgagaaggaaactccatttgaacttattgaagcactt
ctgaaatacattgagactcttaatgttcctggagcagtgctggttttccttcctggttgg
aacttgatatatactatgcagaagcatttagaaatgaatccccattttggaagccaccgg
tatcggattctgcctctgcattctcagattcctagggaggaacagcgaaaagtgtttgat
ccagtaccaactggagttaccaaggttattttgtccacaaatattgctgagaccagcatt
accattaatgatgtcgtttatgttgttgactcttgcaagcagaaggtgaagctgttcact
gctcacaacaatatgaccaactacgctacagtatgggcatccaggacaaatcttgaacaa
cggaaaggacgagccggtcgtgtacgacctggcttctgttttcatctctgcagcagagct
cgttatgatagactcgaaacccatatgacccctgaaatgttccgaacaccactgcatgaa
attgctttgagtattaaactgcttcgtctaggaggaattggtcagttcctggccaaagca
attgaaccaccacctttggatgctgtgattgaagcagagcacaccctccgagagcttgat
gcactagatgctaatgacgagttgacacctcttggacgaatcctggctaaactcccaatt
gagccccgtcttggcaagatgatgataatgggttgtattttctacgtgggggatgctgta
tgcaccatctctgctgccacttgcttcccagagccatttatcagtgaaggcaagcgcctg
ggttatgtccaccgcaattttgcgggaaacaggttttcagatcacgtggcccttttgtca
gtgttccaagcctgggacgatgccagaatgggtggagaagaggcagagatccgcttttgt
gaacacaaaagactcaatatggccaccctcagaatgacttgggaagcaaaagttcagctg
aaagaaattctagttaattctgggttcccagaagaatgtctgatgacacaagtatttaat
aacacgggaccagataacaatttagacgttgtcatctcccttctggcctttggtgtgtac
cctaatgtctgttaccataaagaaaagaggaaaattcttaccactgaggggcgaaatgca
cttatccacaagtcatctgttaactgcccctttagcagccaggacatgaaatacccatct
cctttctttgtgtttggagaaaagattcgcactcgagccatctctgccaaaggcatgacc
ttagtgacccccttgcagctacttctcttcgcttctaagaaggtccaatcagatggagag
attgtgctggttgatgactggatcagactgcagatgtcccatgaggctgctgcttgcata
actgccctccgagcagccatggaggctctggttgttgaagttaccaaagagcctgaaata
atcagcaatttggatccctcaaatgagcgcatgctgaacatgattcggcaaatctctagg
ccttcagctgctggcattagtctcatgattggcaatgcacggtatggagatggccctcgc
ccacccaagatggctagatatgacaatggaggtggattccgaggtcgaggtggccagcga
ggttctggctatcaaggtggatatggtgggagaggatatgggggctctaattcttaccaa
ggaggatatggaagtggaggaggctacagaggctcaggtggtggttatagaggatccgga
ggaggctacagtggtggaatgggtggaggaggctacagaggatctgggggattcccccga
ggaaacagaggtggctatggtatggggtttggaggtggcttttga
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