Gracilinanus agilis (agile gracile opossum): 123244280
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Entry
123244280 CDS
T07702
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas00310
Lysine degradation
gas01100
Metabolic pathways
gas04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
123244280 (SETDB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
123244280 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gas03036
]
123244280 (SETDB1)
Enzymes [BR:
gas01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
123244280 (SETDB1)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
123244280 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
123244280 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
SET
MBD
Tudor_5
Pre-SET
Chromo_MORC2_6th
DUF4537
Chromo
BRCA-2_OB3
Motif
Other DBs
NCBI-GeneID:
123244280
NCBI-ProteinID:
XP_044528598
LinkDB
All DBs
Position
4:475987605..476013750
Genome browser
AA seq
1292 aa
AA seq
DB search
MTSFPGCFGLGTAAAAGMEPQEIAELQQAVVEELGISMEELRQFIDEELEKMDCVKQRKK
QLAELETWVVQKESEVAHVDQLFDEASRAVTNCESLVKDFYSKLGLQYRESSSEDEASKP
TEVIEIPDEDDDVLSVDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKTSSQD
LNKGVLGQVPIELSKDGDLVVSMRILGKKRTKTWHKGTLIAIQTVGAGRKFKVKFDNKGK
SLLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDD
GYASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWE
GTWWKSRVEEVDGSLVKILFLDRLRPLSLLPRHQDDKRCEWIYRGSTRLEPMFSMKTSTA
STLEKKQGGQLRTRPNMGAVRSKGPVVQYTQDLTGTGTQFKPLEPPQTTSLPAPTMSPQV
TELESLESQLAQARKQVAKKSTSFRLGSVGSGHSSPTSPGLSEVVPGGKSGVTQTIRLPP
GSATSAPTFPAFHGMLERAPTEPSYRAPMEKLFYLPHACSHTCLTRVRPVSNAQYRGKNP
LLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMNEIERYLFETSCDFLFLEMFC
LDPYVLVDRKFQPYKPFYYILDITHGQEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFI
NTGWDFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQHKRLDECLPTGVY
ECNKRCKCNLNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIARGSFVCIYAGKILTD
DFADKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPE
ESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSRPTDSGPPHFSA
PTSASVGGCKPPSSEETPKNKVATWLSCNNISDASFADSDSRSSFRTSEGGDGKAGGGRG
DGEKPSTSGTGVKEEGDIKPSKKEESDEQNKILLPSEGSRTFGYNPSPVKTEGIKRPPSK
TNMHQNRRLMGPAQPNPDDVLTLSSSTESEGESGTSRKPLAGQTPATAADSDDIQTISSG
SDGEDFEDKKNLSGPVKRQVAVKSTRGFALKSTHGIAIKSTNMASADKGESVPVRKNTRQ
FYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGT
ELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgacttcctttcctgggtgttttggtttgggtactgctgcagcagctgggatggaacct
caagagattgctgaactacagcaggctgtggtggaggagctgggtatctccatggaagaa
cttcgacagtttattgatgaggaattggaaaagatggactgtgtgaagcagcgcaagaag
cagctggctgagttggagacatgggtggtgcaaaaagagtctgaagttgcccatgttgat
caactctttgatgaagcatccagggcagtgactaattgtgaatctctggtgaaggatttc
tactccaaactggggctgcagtatcgagagagcagttctgaagatgaagcctctaaaccc
acagaagtaattgagattcctgatgaggatgatgatgtcctcagtgttgattcaggtgat
gcaggcagtagaaccccaaaggaccagaagcttcgagaagctatggctgccctgaggaag
tcagcccaggatgtccagaagttcatggatgctgtcaacaagaagactagttcccaggac
ctgaataaaggagtcttgggtcaagtacctattgaattgagtaaggatggtgacctagta
gtcagcatgagaatcctgggcaagaaaaggaccaagacgtggcacaagggaaccctcatt
gccatccagacagttggggctgggaggaagttcaaagtcaaatttgacaacaaagggaag
agcctattatctggaaaccatattgcctatgactaccatcctccagcggacaagttgtat
gtgggcagccgtgtggtagccaagtataaggatgggaatcaggtctggctctatgctggc
atcgtggctgagactccaaatgtcaaaaataagctcagattcctcatcttttttgatgat
ggctacgcgtcctatgtcacacagtctgagctctatcccatttgtagaccactgaagaag
acgtgggaggacatagaggacatctcatgccgtgatttcattgaagaatatatcactgcc
taccccaaccgtcccatggtgctactgaagagtgggcagctcataaagaccgaatgggaa
ggcacttggtggaagtctcgggtggaagaggtggacgggagcctcgtcaagatcctcttc
ctggacagactccggcctctctcccttctcccccgacatcaggatgacaagcgatgtgaa
tggatctatcgaggctcaactcgactggagcccatgttcagcatgaagacatccacagct
tccacactggagaagaagcaaggggggcagcttcgaacccgcccaaacatgggtgctgtg
aggagcaaaggcccagtggtacagtatactcaagatctcactggtactggaacccagttc
aagcccctggaaccacctcagactacctccttgcctgcccctaccatgtcccctcaggtg
actgagttggaaagtctggaaagtcaactcgcccaggcacggaagcaagtggccaaaaag
agcacatcttttcggctaggttctgtgggttctggtcattcatcccctacatcccctggg
cttagtgaggtggtccctggcgggaagtctggagttacccagacaatcagattgcctccg
ggctctgcaacctctgccccgacgttccccgctttccatggtatgctggagcgggctccc
accgagccctcctatcgtgccccgatggagaagcttttctacttgcctcatgcctgtagc
cacacctgcctcactcgagtgcggccagtgagtaacgctcagtaccggggcaagaacccc
ctgctggttcctctgctctatgactttcgaagaatgacggcccgacgccgggtcaaccgt
aagatgggctttcatgtcatctataagacgccgtgtggcctctgcctgaggacgatgaat
gagattgaacgctacctctttgagacaagctgtgattttctgttcttggaaatgttctgt
ttggacccatatgttctcgtggatcggaagttccagccctataaacctttttactacatc
ctagacatcacccacgggcaggaggatgttcctctgtcatgtgtcaatgaaattgatacc
acccccccaccacaggtggcctatagcaaagagaggatcccagggaaaggggtcttcatc
aacactggctgggatttccttgttggctgtgactgcaaagatggttgtcgggacaagtct
aaatgtgcttgccaccagctgaccatccaggcaacagcttgcaccccaggaggccaaatc
aaccctaactctggctatcagcacaagaggctagatgagtgccttcccacaggggtgtat
gagtgtaacaagcgctgcaagtgtaacctgaacatgtgcacgaaccgcttggtgcagcac
gggctgcaggtgcgactgcagctcttcaagacgcagaacaagggctggggcatccgctgc
ttggatgacattgccagaggctcctttgtctgtatctacgcaggcaaaattctaactgat
gactttgcagacaaggagggtctagaaatgggggatgaatactttgcaaacttggaccat
attgaaagtgtggagaactttaaagaaggttatgaaagtgatgccccctgctcctctgac
agcagtggtgtggacttgaaggaccaagaggatggcaacagtggcactgaagacccggaa
gagtccaatgatgacagttcagatgataacttttgcaaagatgaggactttagtaccagt
tcagtctggcgtagctatgccacccggcggcaaacaagaggccagaaagaaaatgggttg
tctgaaacagcctccaaagactcccgacccacagactctgggcccccccatttttctgcc
ccaacatcagcttctgttgggggatgtaaacctccttcctccgaggagacaccgaagaac
aaggtggccacgtggctgagctgcaacaatatcagtgatgctagctttgccgactcagat
agccgatcatccttcaggaccagcgagggtggagatgggaaggctgggggaggccgtggg
gatggagagaaaccctccacctcagggacaggggtcaaagaagagggagatatcaagcca
tccaagaaagaggagtctgatgaacagaataagatcttgctgcctagtgagggttccagg
acttttggttacaacccatcccccgtgaagaccgaaggtatcaagcgtccccctagtaag
accaatatgcatcagaaccggaggctcatgggacctgcccagcccaaccctgatgatgtt
ttgacactgtccagcagcacagaaagtgagggggagagtgggacaagccgaaagcccctg
gctggtcagactccagccacagcagctgacagtgatgacatccagaccatctcatctggc
tctgatggcgaggattttgaagacaagaagaacctgtctggcccagtcaaacgtcaggtg
gcagtgaagtccacacgtggctttgctttaaaatcaacacacggcattgccatcaagtca
accaacatggcatccgcagacaaaggcgagagcgtgcctgtccgtaagaatacgcgccag
ttctatgatggcgaggagtcttgttacattatcgatgccaagctagaaggcaacctgggc
cgctatctcaatcacagctgcagtcctaacctgtttgtccagaacgtcttcgtcgacacc
cacgaccttcgtttcccctgggtggccttctttgccagcaagaggatacgtgctgggaca
gagctgacctgggactataactatgaggtgggcagcgtggaggggaaggagctgctttgc
tgctgtggggccattgagtgccgaggacggcttctttag
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