Gracilinanus agilis (agile gracile opossum): 123249939
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Entry
123249939 CDS
T07702
Symbol
IRF5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
123249939 (IRF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gas03000
]
123249939 (IRF5)
Transcription factors [BR:
gas03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
123249939 (IRF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
Motif
Other DBs
NCBI-GeneID:
123249939
NCBI-ProteinID:
XP_044534957
LinkDB
All DBs
Position
5:complement(123100092..123112679)
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AA seq
463 aa
AA seq
DB search
MGPREAGLGRLPLPSPLFPQKPCAKSRCTAGVCREQSLVSRPGSQSTGPPSCPLFGVFNV
RAVLGSVNPICSLGLLGRPPSGTSEFLDIISSHAAQLPSCLPSLFPSESLPGEEEDEEEE
ELQRMLPSLRITGPKQPAPSMVPYPLPKEEQKWPSPSLQQPLGLGPSPPEPAILAPPAGP
PANFVEVLPGSGPLAANLAPPPEQLLPDLLISPHMLPLTDLEIKFQYRGQPPYSLTISNP
QGCRLFYSQLEATQEQVELFGPVSLEQVRFPGPEGIPSDKQRFYTNQLLDVLDRGLILQL
QGQDLYAIRLCQCKVFWSGPCATPCATSRPIQREKKTKLFSLEQFLNELILFQKGQTTTP
PAFEIFFCFGEEWPDRKPKEKKLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDL
KDRMVEQFKELHHIWQQHQRLPPAPSAPAGTGPWPIHQVGMHQ
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggacctcgggaagccgggctggggaggcttccccttcccagccctctctttccccag
aagccctgtgccaagagccgatgtacggccggggtctgccgagagcagtcccttgtctct
aggcctggctctcaatctactgggccacccagctgccccctctttggagttttcaatgtt
agggcagtgttaggcagtgtcaacccaatctgtagcctcggtctccttggtcgtcctccc
agtggaacctctgagttcttggacatcatttcctcccatgctgcccagcttccctcctgt
ctcccttctttgtttccttcagaatccctccctggtgaagaagaagatgaggaggaagag
gagctccaaaggatgttgccatctctgcgcatcacaggaccaaaacaacctgccccctcc
atggtcccttatcctttgccaaaggaagaacagaagtggccatctcctagtcttcagcaa
cctcttgggctggggccgtcccctcctgagccagctatcctggcccctccggccggcccc
cctgctaattttgtggaagtcctgccaggctctgggcctctggctgccaacttggccccc
cctccagaacaactgcttccagacctgcttataagtccccacatgctgccactgaccgac
ctggagatcaagttccagtaccgaggccagccaccctattctctcaccatcagcaacccc
cagggttgccgcctcttctacagtcagctggaggccacccaggagcaagtggaactcttt
ggtccagtaagcctggagcaggtgcgttttcctggtccggagggcattcccagcgacaag
cagcgcttctataccaaccagttactagatgtgctagaccgagggctcatcctccagctt
cagggccaggatctctatgccatccgcctctgccagtgcaaggtgttctggagtggacct
tgtgccacgccctgtgccacatcacgacccatccagagagagaagaagacaaagctgttc
agtctggagcagttcctcaatgagctgatcctatttcaaaagggccagaccacaactcca
ccggccttcgagattttcttttgctttggggaggagtggccagatagaaaacctaaggag
aagaaactcattactgtacaggtggtgccagtagcagctcggttgctcttagagatgttc
tcaggggagctttcttggtcggctgacagcatccggctacagatctcaaacccagatcta
aaggacaggatggtggagcaattcaaggagctgcatcacatttggcagcaacaccagcga
ctgccacccgccccttctgccccggctggcacagggccctggcctattcaccaagttggc
atgcatcagtga
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integrated database retrieval system
