Gracilinanus agilis (agile gracile opossum): 123250035
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Entry
123250035 CDS
T07702
Symbol
CD4
Name
(RefSeq) T-cell surface glycoprotein CD4
KO
K06454
T-cell surface glycoprotein CD4
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03250
Viral life cycle - HIV-1
gas03260
Virion - Human immunodeficiency virus
gas04060
Cytokine-cytokine receptor interaction
gas04514
Cell adhesion molecules
gas04612
Antigen processing and presentation
gas04640
Hematopoietic cell lineage
gas04658
Th1 and Th2 cell differentiation
gas04659
Th17 cell differentiation
gas04660
T cell receptor signaling pathway
gas05135
Yersinia infection
gas05166
Human T-cell leukemia virus 1 infection
gas05170
Human immunodeficiency virus 1 infection
gas05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
gas05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
123250035 (CD4)
03260 Virion - Human immunodeficiency virus
123250035 (CD4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
123250035 (CD4)
04514 Cell adhesion molecules
123250035 (CD4)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
123250035 (CD4)
04612 Antigen processing and presentation
123250035 (CD4)
04660 T cell receptor signaling pathway
123250035 (CD4)
04658 Th1 and Th2 cell differentiation
123250035 (CD4)
04659 Th17 cell differentiation
123250035 (CD4)
09160 Human Diseases
09161 Cancer: overview
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
123250035 (CD4)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
123250035 (CD4)
05170 Human immunodeficiency virus 1 infection
123250035 (CD4)
09171 Infectious disease: bacterial
05135 Yersinia infection
123250035 (CD4)
09163 Immune disease
05340 Primary immunodeficiency
123250035 (CD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gas04090
]
123250035 (CD4)
CD molecules [BR:
gas04090
]
Proteins
123250035 (CD4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD4-extracel
Tcell_CD4_C
C2-set
Ig_3
ig
I-set
V-set
Ig_2
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
123250035
NCBI-ProteinID:
XP_044535014
LinkDB
All DBs
Position
5:197256610..197327513
Genome browser
AA seq
540 aa
AA seq
DB search
MKASPRPGVCATRRDLQHVSRQAGRAVLLPGSWASSRTLDSCPVPGDGDGAMNTPRDSAP
ALGKAGGCQECLHNRDEPSCRRFSPRESGRLLIRLWLLQEAIMEATRYRAHKQRHPRGQE
INPTRPCAVTTQLGDPPPPPVPPPLLSICLSVSLVRPSNMKERVDSSINQWDVGSFPLTI
KNLETSDSGIYFCEVEDRKQQVQLLVFKVTANPSESVLSGNNVTLTLHSPPNLSELKVEW
HGPGDKSKRILSSNRKTLNLLQVDPTEGGDWDCTVSINGKSLKLSKKVTVHGFECLSKHY
YTISGKDAEFTFPLNLKEQELARMQPNGELTWQVKGAARSAKFSWKDDSLTLDSKFKFKL
TKRHPITLSLSPVLPQHAGSGVFSLMLSSGTLKQKVDLVVMTAVSQDSSPQQLFCDVLGP
IISGLTLKWLLENQTKEILEVSEEQRQLEVKKPKPGMWECQLLLNGTELLKSNSFQLAAE
LEWYHPLYLGIGLGAGASLLLLSGFITCCCARRRHRLRQAERMSQIRRLLSEKKTCQCPH
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctagtccgcgccctggcgtgtgcgccacccggagagacctccagcacgtcagt
cgccaggccgggcgtgcagtgctgctcccaggttcatgggcatcctccaggacgttggat
tcgtgcccggtgcccggggatggcgatggggcaatgaatacaccaagagacagcgcccct
gccctcggaaaggctggaggctgtcaggaatgtttacacaatagggacgagccctcctgt
agacggtttagccctagagagtccggacgacttctgatccggctctggctactgcaggaa
gccattatggaagctactcgatatcgtgcccacaaacagcgtcatcctaggggccaagaa
attaatccaacccgcccctgtgcggtcacgacccagctgggagaccctcccccacccccc
gtgcccccgcctctccttagtatctgtttgtcggtgtccttagtcagaccctcaaacatg
aaagagcgagtggattcctccataaaccaatgggatgtgggcagctttcctctgaccatt
aagaatctggagacatcagactcggggatctacttctgtgaggtggaagacaggaagcag
caggtacaactcctagtgttcaaggtgacagccaatccaagtgagtctgtgctctctggg
aacaacgtgactttaactttgcacagccctcccaacctttctgaactcaaggtggaatgg
catggtccaggagataaaagtaaaaggatcctgagttcaaacaggaaaaccttgaacttg
ctccaagtggatcctacggaagggggagactgggactgcaccgtctccataaatggcaaa
agccttaaactgagcaaaaaagtcacagtacatggtttcgaatgcctctccaagcactac
tatacgatatcgggcaaagatgccgaattcaccttccctctaaatttaaaagagcaggaa
ctggcccggatgcagccaaatggagaactgacttggcaggtgaaaggggctgcccggtca
gccaagttttcatggaaggatgactccttgactctcgacagcaagtttaagtttaagctg
actaaacgccacccgatcactttgagtctctccccagtcttgccccagcatgctggctca
ggagtcttctcactaatgctttcttcagggaccctgaaacagaaggttgacctggtggta
atgacagctgtgtcccaggattcatcacctcagcaattattctgtgatgtgctgggcccc
ataatctctgggctgacactgaaatggctgttagaaaaccagacaaaagaaatcctggag
gtctcagaggagcaaaggcagctggaggtgaagaagccaaagcctgggatgtgggaatgc
caattgctactcaacggtactgaactactgaaatcgaactccttccaactggcagcagag
ttggagtggtaccaccccctatatttgggcatcggtctgggtgcaggagcaagcttgttg
cttctctctgggttcattacatgctgttgtgccaggcgaaggcacaggctgcgccaagca
gagcggatgtctcagatcaggaggctcctaagtgagaaaaagacctgccagtgtccccat
tga
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