KEGG   Gracilinanus agilis (agile gracile opossum): 123250560
Entry
123250560         CDS       T07702                                 
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
  KO
K02084  apoptotic protease-activating factor
Organism
gas  Gracilinanus agilis (agile gracile opossum)
Pathway
gas01524  Platinum drug resistance
gas04115  p53 signaling pathway
gas04210  Apoptosis
gas04215  Apoptosis - multiple species
gas05010  Alzheimer disease
gas05012  Parkinson disease
gas05014  Amyotrophic lateral sclerosis
gas05016  Huntington disease
gas05020  Prion disease
gas05022  Pathways of neurodegeneration - multiple diseases
gas05134  Legionellosis
gas05152  Tuberculosis
gas05160  Hepatitis C
gas05161  Hepatitis B
gas05162  Measles
gas05164  Influenza A
gas05168  Herpes simplex virus 1 infection
gas05169  Epstein-Barr virus infection
gas05200  Pathways in cancer
gas05222  Small cell lung cancer
gas05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:gas00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    123250560 (APAF1)
   04215 Apoptosis - multiple species
    123250560 (APAF1)
   04115 p53 signaling pathway
    123250560 (APAF1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    123250560 (APAF1)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    123250560 (APAF1)
  09172 Infectious disease: viral
   05161 Hepatitis B
    123250560 (APAF1)
   05160 Hepatitis C
    123250560 (APAF1)
   05164 Influenza A
    123250560 (APAF1)
   05162 Measles
    123250560 (APAF1)
   05168 Herpes simplex virus 1 infection
    123250560 (APAF1)
   05169 Epstein-Barr virus infection
    123250560 (APAF1)
  09171 Infectious disease: bacterial
   05134 Legionellosis
    123250560 (APAF1)
   05152 Tuberculosis
    123250560 (APAF1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    123250560 (APAF1)
   05012 Parkinson disease
    123250560 (APAF1)
   05014 Amyotrophic lateral sclerosis
    123250560 (APAF1)
   05016 Huntington disease
    123250560 (APAF1)
   05020 Prion disease
    123250560 (APAF1)
   05022 Pathways of neurodegeneration - multiple diseases
    123250560 (APAF1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    123250560 (APAF1)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    123250560 (APAF1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st NB-ARC WD40_CDC20-Fz Beta-prop_EML_2 APAF1_C WDR55 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd APAF-1-like_WHD Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th NBCH_WD40 CARD Beta-prop_TEP1_C Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_HPS5 WD40_RFWD3 WD40_like RMC1_N PEP5_VPS11_N Ge1_WD40 Beta-prop_NUP159_NUP214 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_Nup120_160 CARD_2 KNTC1_N Beta-prop_WDR11_2nd Beta-prop_WDR75_2nd AAA_16 DUF4441 AAA_22 ATPase_2 NPHP3_N AAA_18
Other DBs
NCBI-GeneID: 123250560
NCBI-ProteinID: XP_044535627
LinkDB
Position
5:complement(232303513..232370276)
AA seq 1251 aa
MDAKARNCLLQHKEALERDIKTSYLMDHMISDQVLSLSEEEKIRNQPTQKKRAAMLIRVL
LEKDNNSYISFYNALLHEGYKDLAFLLQEGLPLSSYNGKDPVDGVTSYVKTVLCEGGVPQ
RPVVFVTRKKLVKSIQEKLYKLNDEPGWVTVYGMAGCGKSVLAAEAVRDHSLLKACFPGG
VHWVSVGQQDKSGLLMKLQNLCTRLDQDGAFSQRLPLNLEEAKDRLRFLMLRKYPRSLLI
LDDIWDSWVLKAFDSHHQILLTSRDKSVTDTVMGPKYAVPVESGLRKEKGLEILALFVNM
KKTDLPEQAHSIVKECKGSPLVVSLIGALLRDFPNRWGYYLRQLQNKQFKRIRKSSSYDY
EALDEAMSISVERLSEDLQKYYKDLSILQKDVRVPTKVLCILWDMETEEVEDILQEFINK
SLLFYDRNGKSFRYYLHDLQVDFLMEKNRNQLKELHRKVVTQFQRCCQAHSLPSDQEDSM
YWYNFLAYHMASADMRQELCNLMFSLDWIKAKTELVGPAHLIHEFMQYRHLLDKKDWTIC
ENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYRQAKLRAKQEVDKGKLYLEWINKK
TIKKLSQLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVLKAETGERLLEVEAHEDEVL
CCAFSKDDRFIATCSADRKVKIWNSRTGELVHTYDEHTEQVNCCHFTNMEHHLLLATGSS
DYFLKLWDLNKQECRNTLFGHTNSVNHCQFSPDDKHLASCSADGTLKLWDVSSANELSSI
DVRQHFLSGDGRQDDVDVAVKCCSWSSDGVRLMAAAANRLLVFDVQSRSLLGEIHTGHSS
TIRFCDFFPKSHLAAVALSHYCVELWNTDTGFKVADCRGHLSWVHCVAFSPDGSSFLTSS
DDQTIRLWETRKVCKNSAIMLKQEVDVVFRDDEVMVLAIDNIRRLQLINGKTGHTDYLTE
AQKSRISCCCLSPGLRYVALGEEDGSIKILELPNGREFRSRIGHEKAVRRVQFTPDGRTL
ISSSDDSTVQVWNWQSEEFVFLKAHQEPVKDFRLLQNSRLLTWSFDGTVKVWNILTGKVE
KDFICHQGTVLSCDVSPNATKFSSTSADKTAKIWNFESTFPLHELRGHEGCVRCSVFSGD
SALLATGDDNGEIRIWSVSSGVLLHSCLPLTVEEGEATYGGWVTDLRFSPDGRTLVSAGG
YLKWWDVESGASLQTFYTNGTNLKTIHVSPGFRAYVTVDNLGILYILQALE
NT seq 3756 nt   +upstreamnt  +downstreamnt
atggacgccaaagctcggaactgtttgcttcagcacaaggaagccctggaaagggacatc
aagacttcctacctcatggatcacatgatttctgatcaagttctcagtttgtcagaggag
gagaaaataagaaatcagcctacccaaaagaagcgagcagctatgctaattagggtatta
cttgaaaaagataataattcatacatatctttctacaacgctctactacatgaagggtat
aaggatttggctttccttctccaagaaggtcttcctctttcttcatataatggaaaggat
ccagtggatggagtgacttcatatgtgaagacagtgctgtgtgaaggtggtgtaccacag
agacctgttgtatttgtgaccaggaagaagctggtgaaatccatccaggaaaagctttat
aaactgaatgatgaaccggggtgggtcacagtttatggtatggcaggctgtgggaagtct
gtcctcgctgcagaagccgtccgggaccacagcctcttgaaagcgtgcttcccaggaggt
gtgcattgggtctccgtcggccaacaggacaaatctgggcttttgatgaaactccagaat
ctctgcacacggctggaccaggatggtgctttctctcagagacttccacttaaccttgag
gaagccaaagatcgcctccgtttcttgatgctgcgcaaatacccaaggtctcttttgatc
ttggatgacatttgggattcgtgggtgctaaaagcttttgacagtcaccatcagattctt
ctcacaagcagagataagagtgtgactgacaccgtgatgggtcccaaatatgctgtccct
gtggagagtggcttaagaaaagaaaaaggactggaaatcttggccctctttgttaatatg
aagaaaacagacctgcccgaacaagctcatagtattgtaaaggaatgcaaaggttcccct
cttgtagtatctttaattggtgccctattacgtgatttccccaatcgttggggctactac
ctcaggcagcttcagaataagcagtttaaaagaattagaaagtcttcatcttatgattat
gaagccctggatgaagccatgtccataagtgtggaaaggctgagtgaagacctccagaaa
tattacaaggacctttccatcctgcaaaaggatgttagagtgcctaccaaggtattatgt
attctctgggacatggagactgaagaggtcgaggacatcctacaagaatttattaacaag
tccctcctattttatgatcgaaatggaaagtctttccgttattacttacatgatcttcaa
gtagacttcctcatggagaagaaccgcaaccaactcaaggagctgcacagaaaggttgtg
acccagttccagaggtgctgccaggcacattccctcccttcagatcaagaagactccatg
tactggtacaactttctggcataccacatggcgagtgccgacatgcgccaggaactttgc
aatctaatgttttccctcgattggattaaagcaaagactgagcttgtaggacctgctcat
ttgatacatgagtttatgcaatatagacatttattggacaagaaggattggaccatctgt
gagaattttcaagagtttttatctctcaatggacaccttcttggacgccagccatttcct
aatattgtgcaacttggtctctgtgaacctgaaacttctgaagtgtacagacaagccaaa
ttacgggctaagcaggaggtcgataaagggaaactttacttggaatggataaacaaaaaa
acgatcaagaagctctcccagctggtcgtgcgcccccacacagatgctgtctaccacgct
tgcttttcagaggacgggcagagaatcgcatcctgcggtgccgataaaaccctacaggtg
ctgaaggcagagacgggagagcggctcctggaggtggaggcccacgaggacgaggtgctt
tgctgtgccttctccaaggatgaccgctttatagccacctgctcggcggacaggaaagtg
aagatttggaattcaaggactggggagctggtacacacctatgatgagcatacggaacag
gtcaactgttgtcattttaccaatatggagcaccaccttctcttagccactggatccagt
gactatttcctcaaactctgggatcttaataagcaggagtgtcggaataccctcttcggt
catacgaattcagtgaaccactgccaattctcaccggatgataaacatttggctagctgt
tcagcggatggaacactgaagctttgggatgtgagctcggccaacgagctcagcagcatc
gatgtgaggcagcacttcctgtctggtgatgggcgtcaggacgacgtggacgtggcggtg
aaatgctgctcctggtccagcgacggggttcggctcatggcggcggctgcaaacaggctc
ttggtttttgatgtccagagcaggagcctgttgggggaaatccatactggtcacagcagc
accatccgcttctgtgatttctttcccaagagccacctggcagcagtggctctgtcccac
tactgtgtggagctgtggaatacggacacgggtttcaaggttgctgactgccgaggacac
ttgagttgggttcactgtgtggcattttctcccgatggttcttcatttctgacgtcttct
gatgatcagacaatcaggctctgggagactaggaaagtatgtaagaattctgctatcatg
ttaaagcaggaagtggatgtcgtgttccgggatgacgaagtgatggttcttgcaatcgac
aacataagacgcctacaactaattaatggaaaaacaggtcataccgattatctgacagaa
gcccagaaatctcgaattagctgttgttgtctgagtccaggcctgcgatatgtggcattg
ggagaagaagatgggtccataaagattctagagctccccaatggaagagagtttcgatct
cgaatagggcacgagaaggccgtacgccgggtgcagttcacaccagatgggagaaccctt
atttcgagctctgatgattccacggttcaggtgtggaactggcagtcggaggaatttgtg
tttctcaaagcacaccaagagcctgtgaaggactttcggctcctgcagaattcacggctc
ctgacctggtcctttgatggcacagtgaaggtttggaacatccttactggcaaagtagag
aaggatttcatttgccaccaaggcacggttctctcctgtgatgtttctcccaacgccacc
aagttttcatccacgtctgctgacaagactgcaaagatctggaattttgagagcactttc
cctcttcacgagctgaggggtcacgagggctgcgtgcggtgctctgtcttttcaggagac
agcgccctcctggccactggagacgataatggagaaatcaggatctggagcgtgtccagc
ggcgtgctgctgcattcctgcctcccgctcaccgtggaggaaggagaggccacctacggg
ggctgggtgaccgacctgcgcttctctccagacggcaggacgctcgtgtctgcgggcggc
tatctgaagtggtgggacgtggagagcggcgcgtccttgcagaccttctacaccaacggc
accaacctcaagaccatccacgtgtcgcccggcttcagagcctacgtgactgtggataat
ctcgggattttgtacatcctgcaggcgttggagtga

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