KEGG   Gracilinanus agilis (agile gracile opossum): 123251329
Entry
123251329         CDS       T07702                                 
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
gas  Gracilinanus agilis (agile gracile opossum)
Pathway
gas04010  MAPK signaling pathway
gas04064  NF-kappa B signaling pathway
gas04120  Ubiquitin mediated proteolysis
gas04140  Autophagy - animal
gas04144  Endocytosis
gas04380  Osteoclast differentiation
gas04620  Toll-like receptor signaling pathway
gas04621  NOD-like receptor signaling pathway
gas04622  RIG-I-like receptor signaling pathway
gas04657  IL-17 signaling pathway
gas04722  Neurotrophin signaling pathway
gas04936  Alcoholic liver disease
gas05132  Salmonella infection
gas05133  Pertussis
gas05135  Yersinia infection
gas05140  Leishmaniasis
gas05142  Chagas disease
gas05145  Toxoplasmosis
gas05152  Tuberculosis
gas05160  Hepatitis C
gas05161  Hepatitis B
gas05162  Measles
gas05168  Herpes simplex virus 1 infection
gas05169  Epstein-Barr virus infection
gas05170  Human immunodeficiency virus 1 infection
gas05171  Coronavirus disease - COVID-19
gas05200  Pathways in cancer
gas05222  Small cell lung cancer
gas05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
gas05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:gas00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    123251329 (TRAF6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    123251329 (TRAF6)
   04064 NF-kappa B signaling pathway
    123251329 (TRAF6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    123251329 (TRAF6)
   04140 Autophagy - animal
    123251329 (TRAF6)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    123251329 (TRAF6)
   04621 NOD-like receptor signaling pathway
    123251329 (TRAF6)
   04622 RIG-I-like receptor signaling pathway
    123251329 (TRAF6)
   04657 IL-17 signaling pathway
    123251329 (TRAF6)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    123251329 (TRAF6)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    123251329 (TRAF6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    123251329 (TRAF6)
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    123251329 (TRAF6)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    123251329 (TRAF6)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    123251329 (TRAF6)
   05161 Hepatitis B
    123251329 (TRAF6)
   05160 Hepatitis C
    123251329 (TRAF6)
   05171 Coronavirus disease - COVID-19
    123251329 (TRAF6)
   05162 Measles
    123251329 (TRAF6)
   05168 Herpes simplex virus 1 infection
    123251329 (TRAF6)
   05169 Epstein-Barr virus infection
    123251329 (TRAF6)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    123251329 (TRAF6)
   05135 Yersinia infection
    123251329 (TRAF6)
   05133 Pertussis
    123251329 (TRAF6)
   05152 Tuberculosis
    123251329 (TRAF6)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    123251329 (TRAF6)
   05140 Leishmaniasis
    123251329 (TRAF6)
   05142 Chagas disease
    123251329 (TRAF6)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    123251329 (TRAF6)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    123251329 (TRAF6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gas04131]
    123251329 (TRAF6)
   04121 Ubiquitin system [BR:gas04121]
    123251329 (TRAF6)
Enzymes [BR:gas01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     123251329 (TRAF6)
Membrane trafficking [BR:gas04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    123251329 (TRAF6)
Ubiquitin system [BR:gas04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    123251329 (TRAF6)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 SlyX zf-RING_5 zf-TRAF_2 TRAF3_RING RING_XB3-XBAT31 zf-RING_11 Sina_ZnF PUMA_CC DUF4455 DUF7310 U-box Rhabdo_ncap_2 PspA_IM30 DUF16 Tropomyosin Med21 Cortex-I_coil CENP-F_leu_zip Spc29
Other DBs
NCBI-GeneID: 123251329
NCBI-ProteinID: XP_044536502
LinkDB
Position
6:complement(260464100..260474609)
AA seq 522 aa
MSLLNCEDSCGASHPESDCCAGMASACSTVTKDDSVNGSTIPGNLPSSLREEIQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKACIVKSIRDAGHKCPVDNAILLETQLFPD
NFAKREILSLTVKCPNEGCLLKMELRHLEDHQTHCEFALAECLQCHLSFRKYLLHNHMVV
ECPRRQVSCVNCAAPMPFEEKEFHDQNCPLATVFCEYCSTMLIREQMPNHYDIDCPVAPI
PCTFSTFGCREKMPRNHLARHLQEDTLAHMRMMAQAIENISIAAFNPKLHQRENFQETIQ
QLESRLVIQDHQIRELTAKMETQSACVGDLKRTIRTLEDRIAEMEAQQCNGIYIWKINNF
GMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPSAQRCANYISLFVHTMQGEYDS
HLPWPFQGTIRLTILDQSEAPVRQNHEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLQ
ALRQRTFIKDDTLLVRCEVLTRLDMNSLRREGFQPRSTDAGV
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgagtctgctaaactgtgaagacagctgtggcgccagccatccagaaagtgactgctgt
gcgggtatggctagtgcctgtagcactgtcacaaaggatgacagtgtaaacggaagcacc
attcctgggaatcttcccagctccttaagggaagagattcaaggctacgatgtggagttt
gatccaccccttgaaagcaagtatgagtgccccatctgtctgatggcattacgggaagct
gtgcagaccccgtgtggccatcgattctgcaaagcctgcattgtcaagtcaataagagat
gcaggccacaaatgtcctgtagacaatgcaatactcctagaaactcaactatttcccgac
aattttgctaaacgggaaatcctctcactcacggtgaaatgtccaaatgaaggttgtctg
ctgaagatggaactgagacatctagaggatcaccagacacattgtgagtttgccctagca
gagtgccttcagtgccacctttcctttcggaaatatctccttcacaatcatatggtcgtg
gagtgtccaaggcgacaagtgtcttgtgtgaattgtgccgcaccgatgccatttgaagag
aaagagttccatgaccagaactgcccattggcaacagtcttctgcgaatactgcagtacc
atgctcatccgggaacagatgcctaatcactatgatatagattgcccagtagctccaatt
ccatgtacattcagtacatttgggtgtcgtgagaagatgccgaggaatcatctggcacgt
cacctgcaagaggatactctggcccacatgagaatgatggcccaggccattgagaacatc
agcatcgctgctttcaaccccaagctccaccagcgtgagaacttccaagaaaccattcag
caattagagagccgccttgtgatacaagaccaccaaatccgagagctaacagctaagatg
gaaactcagagtgcttgtgtgggcgacctcaaacgcaccattcgaacccttgaggacaga
attgcagagatggaggcccagcagtgcaatggcatttacatctggaagattaacaatttt
gggatgcacttaaaatcccaagaagaggagaagcctgttgtcatccatagccccggattc
tacaccggcaaacctggctacaagctctgcatgcgccttcatctgcagctaccgagtgct
cagcgctgtgctaactatatttccctctttgtccacacgatgcagggtgagtatgacagc
catcttccctggcccttccagggcacaatacgccttactattctcgatcagtccgaagcc
cctgtgaggcagaatcacgaagagatcatggatgccaagccagagctgcttgccttccag
agaccaaccatcccccgcaaccccaaaggttttggctatgtgactttcatgcacttgcaa
gcccttaggcaaagaaccttcattaaagatgatactttacttgtgcgttgtgaggttttg
acccgtctggacatgaatagcctacggagggagggctttcaaccacgtagtacagacgca
ggggtatag

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