Gracilinanus agilis (agile gracile opossum): 123253419
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Entry
123253419 CDS
T07702
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04360
Axon guidance
gas04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
123253419 (TRPC5)
09158 Development and regeneration
04360 Axon guidance
123253419 (TRPC5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gas01009
]
123253419 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gas04040
]
123253419 (TRPC5)
Protein phosphatases and associated proteins [BR:
gas01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123253419 (TRPC5)
Ion channels [BR:
gas04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123253419 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
Rod_CreS
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
123253419
NCBI-ProteinID:
XP_044538548
LinkDB
All DBs
Position
X:58525046..58616758
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AA seq
1003 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAEAELSAEEKAFLTAVEKGDYASVKQVLHEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKRFAKDLLDQARSSRELEIILNHRDDHTEDLDPQKCHDLAKLKVAIKYHQKE
FVAQPNFQQLLATLWYDGFPGWRRRHWGVKMLTCITIGLLVPMLSIAYLVATRSNLRLFI
KKPFIKFICHTASYLTLLFMLLLASQHIVRMDLYMQGPPPTVVEWMILPWILGFIWGEIK
EMWDGGFNEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRASDEPDNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGATLPPP
FNIIPSPKSFWYLGHWFHRHIYPKRDSADGRKHGNLKMFTERHADSLIQNQNYQEVIRNL
VKRYVAAMIRSSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPQRRSFSTSSTEISQ
KDDANDGSGGEKAKSKSVSFNLTGKKKDCNVSTLIKTVSKMDVGGATAAPTTPQVKPKTS
GSTKHSFMSNPLQKLSSSKKESFKRLGLLFSKMNGHLAEPSAEPMYTISDGIIQPHYMWQ
DIRYSHMDPERGEASCSKSESNLAEADFGGGACAPSPSARAAGQSGECPLAASSSLHCAS
SICTSNSKLIDSTEDVFDSWGEACDLLMNQWKDGQEEHVTTRL
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctttactacaagaaggtgaactactcaccctaccgggaccgcatcccgctg
cagatcgtgcgggcggaggccgagctctccgcagaggaaaaagccttcctcactgccgtg
gaaaagggcgactatgccagcgtgaagcaggtgctgcacgaggccgaaatctactacaat
gtcaacatcaattgcatggaccccctgggccgtagcgccctgctcatcgccatcgaaaat
gagaacctcgagatcatggagctgctactgaaccacagcgtctacgtgggtgatgccttg
ctctatgccatccgcaaggaggtggtcggggcagtggagctgctgcttagctacaggaag
cccagcggtgagaaacaggtccccactctgatgatggacacccagttctcggagttcacg
ccagacatcacacccatcatgctggctgcccacaccaacaactacgagatcatcaaattg
cttgtccagcgccgggtcaccatccccagaccccaccagattcgctgcaattgtgtggaa
tgtgtgtccagctcggaggtggacagcctgcgccactcccgctcccgcctcaacatctac
aaggccctggccagcccctcactcatcgccctgtccagtgaggaccccatcctgactgcc
tttcgcctcggatgggaactcaaggagctcagcaaagtggagaacgagtttaaggccgag
tacgaggagctctcccagcagtgcaaacgcttcgccaaagacctcctggaccaggctcgc
agctcccgggagctggagatcatcctgaaccaccgggatgatcacaccgaggaccttgac
ccccagaagtgccatgacctggccaagctaaaagtcgcgatcaagtaccaccagaaagag
tttgtcgctcagccaaacttccagcagctgctggccacactgtggtacgatggctttcca
ggctggcggcggagacactggggagtcaaaatgttgacctgcatcaccattggcctcctg
gtccccatgctgtctatagcctacttggtcgccaccaggagcaacctcaggctgttcatc
aagaaacccttcatcaagtttatctgccacacagcctcctacctgacacttctcttcatg
cttctcctggcatcccaacacatagtcaggatggacctgtacatgcaggggccaccaccc
actgtggtagagtggatgatactgccttggattctaggtttcatttggggagaaattaag
gagatgtgggacggtggcttcaacgagtacatccacgactggtggaacctgatggatttt
gccatgaactcgctctatctggcgacaatctcactgaaaatcgttgcctacgtcaagtac
aatggttctcgtcccagagaagaatgggaaatgtggcacccgaccctgattgcagaagct
ctctttgccatctccaacattttaagttccttgcgtctcatatccctgttcacagccaac
tcccacctgggacctttgcagatctccttggggcgcatgttgcttgacatcctcaaattc
ctctttatctattgcctggtcctactggcttttgccaatggattgaaccagctttacttt
tattatgagaccagagcctccgatgaacccgacaactgcaaggggatccgctgcgagaaa
caaaacaacgccttctccacgctttttgagaccctccagtcgcttttctggtcggtgttt
gggcttctgaatctctacgtcaccaacgtcaaagcaagacacgagttcactgagtttgtg
ggcgcgactatgttcgggacatacaacgtcatctccctggtggtgctgctgaacatgctc
attgccatgatgaacaattcctaccagctcattgctgatcatgccgacattgagtggaaa
tttgcccggaccaagctctggatgagttactttgatgaaggggccaccttaccgcctccc
ttcaacatcatcccgagccccaagtccttctggtacctcggccattggttccacaggcat
atttaccccaagcgggattcggcagatggacggaagcatgggaacctgaaaatgttcact
gaacgccatgctgacagcctgattcaaaatcagaattaccaggaagtgatccggaatttg
gtcaaaagatacgttgcggccatgatcagaagctccaaaacaaatgaggggctaacagaa
gaaaactttaaggaattaaagcaggacatctccagctttcgttatgaggttcttgacctg
ttgggcaatcgcaaacctcaacggaggagcttttccacgagcagcactgaaatctcccag
aaggatgatgctaatgatggtagtggtggggaaaaggccaaatccaagagtgtctctttc
aatctaactggcaagaaaaaagactgcaacgtgtcaaccctgatcaagaccgtgtccaag
atggatgttggtggtgcaactgccgccccgactactcctcaagttaagccgaaaaccagt
gggtcaactaagcactccttcatgagcaatccactgcagaaactgtcaagctccaagaaa
gagtctttcaagagactgggtctcttgttctccaagatgaatgggcatctggccgagccc
agcgccgagccgatgtacacgatctcggacggaatcattcagcctcactacatgtggcaa
gacatcagatattcccatatggatccagagaggggagaggctagttgctcaaaaagcgag
agcaacctcgcagaggcggactttggtgggggcgcatgtgcccccagcccaagtgcgagg
gctgctgggcagagtggtgaatgccctcttgcagcctccagttctctccactgtgcttct
agcatctgcacatccaactccaaactgattgactccacagaggatgtgtttgactcgtgg
ggggaggcttgcgatttgcttatgaaccaatggaaggatggacaggaagagcatgttaca
actcggctttga
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