KEGG   Gracilinanus agilis (agile gracile opossum): 123254429
Entry
123254429         CDS       T07702                                 
Name
(RefSeq) single-stranded DNA cytosine deaminase-like
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
gas  Gracilinanus agilis (agile gracile opossum)
Pathway
gas03250  Viral life cycle - HIV-1
gas05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:gas00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    123254429
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    123254429
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gas03019]
    123254429
Messenger RNA biogenesis [BR:gas03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     123254429
SSDB
Motif
Pfam: NAD1 APOBEC2 SNAD4 APOBEC_N NAD2 APOBEC3 APOBEC4 APOBEC1 APOBEC4_like APOBEC_C dCMP_cyt_deam_1 Toxin-deaminase TMEM87A-B_GOLD
Other DBs
NCBI-GeneID: 123254429
NCBI-ProteinID: XP_044539390
LinkDB
Position
Unknown
AA seq 200 aa
MPVSLRKEISEEEFHTHFSSIKAPHQTLLCFGLKEEDKTLWKLWGHAYNNPGQCHAETLV
LREIENYLKTNISNSAKYNITWFLSYSPCHSCCDKIINFLMNSQTKIEFNIKAAKPYQFN
NDQNPKGIKMLKRVGILFKMMECNDFEECFYLFVDPCTKFSAWPDLEAQSLANVTLFHHY
LGQEENILDIHLFPNDDSSS
NT seq 601 nt   +upstreamnt  +downstreamnt
atgcctgtaagcctaaggaaagaaatatctgaagaggaattccatacacatttttccagt
ataaaagcaccccaccaaaccttgctctgctttggtctgaaagaagaagataaaacactt
tggaaattatggggtcatgcttacaataatccaggccaatgtcatgctgaaaccctagtt
ttaagggaaattgaaaactatctgaagacaaatatttccaactctgcaaagtacaatatt
acatggtttctttcctatagtccctgccactcatgttgtgataaaataatcaatttttta
atgaactctcaaactaaaattgaatttaacatcaaagcagcaaagccatatcaattcaat
aatgatcagaatccaaaaggcataaaaatgctcaagagagtaggaattctattcaagatg
atggaatgtaatgactttgaagaatgtttctacttatttgtggatccttgcaccaagttc
agtgcatggcctgatctagaagcgcaaagtttagcaaatgtaactttatttcatcattat
ttgggccaggaggagaacatattagatatccatttatttccaaatgatgattcttcttca
g

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