Gasterosteus aculeatus (three-spined stickleback): 120808034
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Entry
120808034 CDS
T07457
Symbol
dse
Name
(RefSeq) LOW QUALITY PROTEIN: dermatan-sulfate epimerase
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
gat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
120808034 (dse)
Enzymes [BR:
gat01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
120808034 (dse)
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Motif
Pfam:
DUF4962
CobN-Mg_chel
NrtR_WHD
Motif
Other DBs
NCBI-GeneID:
120808034
NCBI-ProteinID:
XP_040016534
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All DBs
Position
XVIII:3360898..3374328
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AA seq
958 aa
AA seq
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MRTHTRGXPTVFLIGLLWPLLAPAAAAATAEADPSGGIPFMGGNYNGHPMLYFNRGDVEQ
LQYAATGTHRDMARRIRDAGETMLEHPEMYLPPWSPAEFSARWNEVYGNNLGVLSMFCML
YPHRAGALELAMDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYEYLNKGQQE
RFLQVIGNASRLMYEKSYVRGWGFQYLHNHQPTNCVALLTGSLVYMTQGYLQEAYLWTKQ
VLSIMEKSMVLLQDVTDGSLYEGVAYGTYTTRSLFQYMFLVQRHFSISHFDHPWLLKHFA
FLYRTILPGFQRTVAIADSNYNWFYGPESQLVFLDRYVLRNGSGNWLADVIHQNRVVEGP
GQAGKGQRWCTLHTEFIWYDPELIAKPPPDFGTSQLHYFEDWGVVTYGGALPADTNRTFL
SFKSGKLGGRAIFDMVHRNKYKEWIKGWRNFNAGHEHPDQNTFTFAPNGVPFVTEALYGP
KYTLLNNAVLFSSALPGSCFKPWAGQVTEACDSKWLKYKAGLAADAEGRVEAAMERQGMV
FIRGEGQSAYNPELRIRNFQRNLLLLHPQLLLLVDHIHLHPDSPTRAMSAFFHNTELPFQ
GTKADGVHGAFASHDEDKYKMFWMDDTGYSSKGVVGYWNYPRGYPYNGSNYVNVTMPLRY
PHTRVAYIFFGPGVDVQSFSLRGDDQRVDIYLATKDHMYTIYLLTGELPSKPLFAMVLMD
HKKIVFEKGAPGGAEDSSPAEVEEYVNVMEDNLQHVKPVFQQMERHILGRVLNTANFRKT
AERLLQFTDKKKTEEVIEKMFAMSKKQGRGKGGKKVNLGETLSESLPDIFAQIEVTEKKA
RQRTSKRTSEDSPEEGGGAFMEYADGRKNRKGAFVKGRRFKEVHMVATAASEGLSSTASY
IRLFLLLNTATFFLLLAVLLTRFQRGRSLHTQRCFYTILLIDCFILLYLYSSCSHTQC
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgagaacccacacccgcgggncccccacagtcttcttaataggtctactgtggcccctg
ctcgccccggcggcggcggcggcgacagcggaagcggaccccagcggaggaatccccttc
atggggggcaactacaatggtcacccgatgctgtacttcaaccggggggatgtggagcag
ctgcagtacgcggccacggggacccaccgggacatggcgaggaggatccgcgatgccggc
gaaaccatgctggagcacccggagatgtacctgcccccctggagccccgcggagttcagc
gcccgctggaacgaggtgtacggaaacaacctgggtgtgctgtccatgttctgcatgctg
tacccgcacagggcgggggccctggagctggccatggactacatggagaggatggcggct
cagcctagttggctggttaaagacgccccctgggatgaagtccctctggcgcactctctg
gtcggcttcgccaccgcctacgacttcctgtacgagtatttgaacaagggccagcaggag
cgcttcctccaggtgatcggcaacgcgtcgcgcctcatgtacgagaagtcctacgtccgg
ggctgggggttccagtacctgcacaaccaccagcccaccaactgcgtggcgctgctcacc
ggcagcctggtttacatgacacaaggttacctccaggaggcctacctgtggaccaagcag
gtcctgtccatcatggagaagtccatggtcctgctgcaggatgtgacggacggctccctg
tatgaaggggtggcctacgggacttacaccacccgctctctgttccagtacatgttcctg
gtgcagcgccacttctccatcagccactttgaccacccctggctgctcaaacactttgcc
ttcctgtacaggaccatcctgccaggattccagaggaccgtggccatcgcagattccaac
tacaactggttctacgggccggagagccagctggtcttcttggatcgctacgtgttgcgt
aacggcagcgggaactggctggcagacgtgattcatcagaacagggtggtggagggaccg
gggcaggctggaaagggccagcgatggtgcacgctccacacagagttcatctggtacgac
ccagagctgatcgccaagcctccgccagactttggaacgtcccaactccactactttgag
gactggggcgtggtgacgtacggcggcgctctacccgccgacaccaaccgcacctttctc
tccttcaagtccgggaagctggggggacgtgctatcttcgacatggttcacagaaacaag
tacaaagagtggatcaaagggtggaggaacttcaacgccggccacgagcacccggatcag
aacaccttcacgttcgcgcccaacggcgtcccgttcgtcaccgaggcgctctacgggccc
aagtacacgctgctgaacaacgcggtgttgttcagctccgcgctgccggggagctgcttc
aagccgtgggccgggcaggtcacggaagcctgcgattccaagtggctgaagtacaaggcg
ggcctggcggccgacgccgagggcagagtcgaggccgcgatggagagacagggaatggtc
ttcatccgcggcgagggacaatctgcttataaccctgagctgaggatcaggaacttccag
agaaacctgctccttctccacccgcagctgctgctcctggtggaccacatccacctgcac
ccagacagcccgaccagggccatgagcgccttctttcacaacacggagctcccgttccag
ggcacgaaggccgacggcgtgcacggagcgttcgcgtcacacgacgaggacaagtacaag
atgttctggatggacgacacaggctacagcagcaaaggagtggtaggttattggaattac
cccagagggtacccgtacaatggctccaactatgtgaacgtcacaatgccgttgaggtac
cctcacaccagggtggcctacattttcttcggcccgggcgtggacgtgcagagcttcagc
ctgcgcggcgacgaccagcgggtggatatttacctggccaccaaggatcacatgtacacc
atctacctgctgaccggggagctccccagcaagcccctgttcgccatggtgctaatggac
cacaagaagatcgtgttcgagaagggggcgccggggggcgcggaggacagctcgcccgcc
gaggtggaggaatacgtcaacgtgatggaggacaacctgcagcacgtcaagcccgtcttc
cagcagatggagagacacatcctggggcgggtcctgaacaccgccaacttccgcaagacc
gcggagcgcctcctccagtttaccgacaagaagaagacggaggaggtgatagagaagatg
ttcgccatgtccaagaagcagggcaggggcaaaggggggaagaaggtgaacctcggggag
acgctctccgagagtctgccggacatttttgcacaaattgaggtgaccgagaagaaggcg
cggcagaggacttcaaagcgtacttctgaggacagtccagaggagggcgggggagccttc
atggagtacgcggacggccgcaaaaacagaaagggggcgtttgtgaagggccgtagattc
aaggaggtgcacatggtggccacggccgcgagcgaggggctctccagcaccgcctcctac
atcagactctttctcctcctgaacaccgccaccttctttctgctgctggccgtgttactg
actcgcttccagagaggccggagtttgcacacgcagaggtgtttctacaccatcctcctg
atcgactgcttcatcttactgtacctgtactcctcctgctctcacacacagtgttga
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