Gasterosteus aculeatus (three-spined stickleback): 120810231
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Entry
120810231 CDS
T07457
Symbol
setdb1b
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat00310
Lysine degradation
gat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120810231 (setdb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120810231 (setdb1b)
Enzymes [BR:
gat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
120810231 (setdb1b)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120810231 (setdb1b)
Heterochromatin formation proteins
Other heterochromatin formation proteins
120810231 (setdb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_4
Tudor_5
DUF5604
SET
MBD
Pre-SET
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
120810231
NCBI-ProteinID:
XP_040020530
UniProt:
A0AAQ4S4A6
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All DBs
Position
XX:6839938..6849467
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AA seq
1256 aa
AA seq
DB search
MDIGDGMEVDGWDSNMEQELGISLDELKKWIDEAVEKSEIVQKKKAQLTELKEWVEQKEE
EEARTDMLLSDANKSILECEKLVKETYQKNGLVYKESSSEDEGGGGGVLSSEVIEIDDDD
DDDVIAVGCLVPAKKPVTPCKDPVLNEASSVLQKTTQQLQKLVQLVSKPSPGAPLLRSPS
HPPSQSVPAVFVSQAQSQSMTQPNPNATEDELRVGMMILGKKRTKTWHRGALVTISPVGN
GIFKYKVKFDKGKSLLSGNHVAFEYNPTLEILYVGARVVANYKDGSLVWLYAGIVAEMPN
NKNRMRFLIFFDDGYASYVTLPDLHPICRPLKRTWEDIEDASCRDFIEEYITAYPSRPMV
LLKVGQIIKTEWEGTWWKSKVEEVDGSLVKILFLDDKRSEWIYRGSTRLEPMFNLKMTTA
NTQEKKLAGQQRSRPNMGVMRSKGPVVQYTSDVLVGSSPVKAQQGSPSQPPQTPPQQQPQ
PQQQLQLQQQQQQQQQLPQQQTRPEPPQTQQVQQIQQTIPPSQPPRVDNKHQMAKKSTSP
FVAGVGGTHASKIMMQSLSSTPSDPASARILSGQSPASPAFTQSYPRLPPLAAAPPPVSQ
AMATIPRQPSYRAPTDRIFYLAHTCQPACLNRVRPAKSDIHRGKNPLLTPLLYDFRRMTG
RRKVNRKMSFHVIYKAPCGLCLRNMAEIQFYLFETRCDFIFLEMFCLDPYVLVDRPFQPQ
RPFYYIHDITAGREDIPLSCVNEIDSTPPPKVAYSKERIPEDGVYINTSSDFLVGCDCTD
GCRDKSKCSCHQLTLQATGCTPGAQINTNAGFLHKRLEECLPTGIYECNKRCKCCAQMCT
NRLVQHGLQVRLQLFKTQNKGWGIRCLDDVAKGSFVCIYAGKILTDDFADREGLEMGDEY
FANLDHIESVENFKEGYESEAHCSDSEGSGVDVSRIKIQPSALVSANPVGRPPKKGQSSS
SSGDSEDDEDKDSKSEEESDSSDDTFVKESNFSTSSVWRSYTTRGQVKGNKEGSQDSKDE
MSALARGAGDDKPPSMPEETGKSKVASWLTSQELKKESGDGKSQVKSETGKKQEVMTLSD
SDEVQTISSGSDDNKEREKVTLGVTKKQVAVKSTRGIALKGGHGMMVKTGTPGGGGGPGG
PGGKTGQQGQPGGGGENTPKNTRLFFDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNV
FVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKVLLCCCGSTECRGRLL
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggacataggcgatggaatggaggtggatggctgggattctaatatggagcaagagctg
ggcatttctttggacgagctgaagaagtggatcgatgaagcagtggagaagagtgagatt
gtgcagaagaaaaaggctcagctgacggagctcaaggaatgggtggagcagaaagaagaa
gaggaggcgaggacagacatgctcctcagcgatgccaacaagtccatattggagtgtgag
aagctcgtgaaggaaacttaccagaagaacggtctcgtttacaaagagagcagctcggag
gatgaggggggcggaggaggcgtgctgtcctctgaggtcatcgagatagacgacgatgac
gacgatgatgtcattgctgtcggctgtttggttcctgcaaagaagccggtcactccctgc
aaagatccagtgttaaatgaggcctcctcagtgctacagaaaacaacccagcagttgcag
aagttggtccaacttgtcagcaagccgtcacctggtgcgccgttgcttcgatctccgtca
catcctccatctcagtcagtgccagcagtgtttgtatcccaggctcagtctcagtccatg
acgcagccgaacccaaacgcaacagaagatgagcttcgagtcgggatgatgattttggga
aagaaacgcaccaagacctggcacaggggtgcccttgttactatcagcccagtcggaaat
ggtatattcaagtataaagtgaagtttgataaaggaaagagtctgctttccggaaatcac
gtggctttcgagtacaacccgaccctggagatcctgtatgtcggcgctcgcgtagtcgcc
aactacaaggacggcagcctggtgtggctctatgccgggatagtagcagagatgcccaac
aacaagaaccggatgaggtttttgattttctttgatgacggctatgcttcatacgtgact
ctacctgacctccacccaatttgcagaccgttaaagcgtacctgggaggacatagaggac
gcatcttgtcgagacttcattgaggagtacatcactgcatatcccagcaggcctatggtg
ctgctaaaggttgggcagatcatcaagaccgagtgggagggaacttggtggaagagcaaa
gtggaggaggtggatggcagcttggtcaagatcctctttttggatgacaagaggagtgag
tggatttacagaggctccaccagactggagccaatgttcaacctgaagatgaccaccgcc
aacacccaggagaagaagttggctggccagcagaggtcgcgacctaacatgggggtgatg
aggagtaaaggtccggtagttcaatacaccagcgacgtacttgttggatcatcgcccgtc
aaagcgcagcaaggctcacccagccagcctccacagacaccaccacagcaacagccgcag
ccccagcaacaactgcaactacaacagcaacaacaacaacaacaacaactgccacaacaa
cagacgcgtcctgaacccccacagacccaacaagtccagcaaatccagcagacgattcct
ccttcacagcctccacgtgttgacaataagcatcagatggcaaagaagagtacttctcca
tttgtcgcaggcgtgggaggcacacatgcctccaaaatcatgatgcagtcgctctcttcc
actcccagcgaccccgctagtgcgagaattttgagtggccaaagtcctgcttcccctgcc
ttcacgcagtcatacccgagacttccccccctggctgccgcaccgcctcccgtgagccaa
gccatggccaccatcccgcggcagccctcgtaccgcgccccgacggaccgcatcttctac
ctggcgcacacctgtcagcccgcgtgtctcaatcgcgtccgacctgcaaagtcagacatc
caccgggggaagaaccccctgctcacacctttactgtacgatttcagacgcatgacgggg
cgacgaaaagtcaaccgcaagatgtcctttcacgtgatctacaaggctccgtgcgggctt
tgcctgcgcaacatggcagagatccagttctacctcttcgagacacgctgtgactttata
tttttagagatgttctgtctggacccttatgtgctcgtggaccggccattccagccgcag
aggccgttctattacattcacgacatcactgctggaagagaggacattccgctctcctgc
gtcaacgagattgattccactccgcctccgaaagtcgcttacagtaaagagcgtattcct
gaagatggcgtatacatcaacaccagttcggacttcctggttggatgtgattgcaccgac
ggctgtcgcgacaagtccaaatgctcttgccaccagctgacccttcaggccacaggttgc
acaccgggggctcagatcaacacaaacgctggatttttgcacaaaagattagaggagtgt
ctcccaacagggatctacgaatgcaacaagcggtgcaaatgctgtgcccagatgtgcacc
aaccgtttggtgcaacacggcctccaggtgcgcctccagctcttcaagacccagaacaaa
ggctggggtatccgctgtctggacgacgtggccaagggctcttttgtctgcatctacgct
ggcaaaattttgaccgacgactttgcggacagagaaggtctagagatgggggacgagtat
tttgccaatctggaccacatagagagcgtggagaacttcaaggagggctacgagagcgag
gctcactgttccgacagcgaggggagcggcgtggacgtgtccagaataaaaatccagcca
tctgctttagtatcagctaacccggttgggaggccgcccaaaaagggacaaagttcaagc
tcatcaggggacagcgaggacgacgaagacaaagattcaaagagcgaagaggaaagtgac
agttcggacgacacgtttgtgaaggaaagcaatttcagcaccagctccgtgtggaggagt
tacaccacacgtggtcaggtcaagggcaacaaggaagggagtcaagacagtaaagacgaa
atgagcgcgttagccagaggagccggggacgataagcccccgtccatgccagaagagacg
ggcaaaagcaaagtggcttcctggctcaccagccaggagctcaagaaggagtccggagac
ggaaagagtcaagtgaagtcagaaacggggaagaagcaggaagtgatgactctctccgat
agtgatgaggttcagaccatcagctctggatctgatgacaacaaggagagagaaaaagtc
accctgggtgtgactaagaagcaggtagcagtgaaatccacgcgcggcatcgccctgaag
ggcggccacgggatgatggtgaaaaccggcacacctggaggcgggggagggccgggaggt
ccgggagggaaaaccggacagcagggtcagcctggaggaggtggagagaacactcccaaa
aacacccgattgttctttgacggggaagagtcctgctacatcatcgatgccaagttggaa
ggaaaccttgggcgttacctgaatcacagttgtagtcccaaccttttcgtgcagaatgtg
tttgtggacacgcatgatttgaggtttccctgggtggcgttctttgccagcaagcggatc
cgtgcgggcacagagctgacctgggactacaactacgaggtgggcagcgtggaggggaag
gtgctgctctgctgctgcgggtccactgagtgcagaggaagactactgtga
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integrated database retrieval system
