KEGG   Gasterosteus aculeatus (three-spined stickleback): 120810416
Entry
120810416         CDS       T07457                                 
Name
(RefSeq) LOW QUALITY PROTEIN: rano class II histocompatibility antigen, A beta chain-like
  KO
K06752  MHC class II antigen
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04145  Phagosome
gat04514  Cell adhesion molecules
gat04672  Intestinal immune network for IgA production
gat05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gat00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    120810416
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120810416
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    120810416
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120810416
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gat04147]
    120810416
Exosome [BR:gat04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120810416
  Exosomal proteins of epithelial cells
   120810416
  Exosomal proteins of breast milk
   120810416
SSDB
Motif
Pfam: C1-set C2-set_2 C2-set_3
Other DBs
NCBI-GeneID: 120810416
NCBI-ProteinID: XP_040020851
LinkDB
Position
XX:8687524..8689030
AA seq 235 aa
YVTMHSHGFFSWPLLLLSCSRAAAVFVQGLLCCQFALLDVGGYLEQHFLEKLLLIQYSST
LGSEIDDFMGAVQGTVLLSHADLFVHGFIHQAEPSVRLRSVHAADSRHPRMLLCTGYGFY
PKQIRVMWLRNGNNVTSDVTSTEELSNGNWLYQIHSYLEFTPRSGGEISCVVEHASLTQP
KVYDWDAAKESQLNRIALGTSGLLLGLLFXGLIYYKKENAGERRALETRDRNQNL
NT seq 708 nt   +upstreamnt  +downstreamnt
tatgtaaccatgcatagtcacggcttcttttcatggcctttgcttcttctttcatgttca
agagctgctgctgtctttgttcagggtttactttgctgccagtttgctttgttggatgtc
ggcggttatttggagcagcacttcctcgaaaagttgcttctgatccaatacagcagcact
ttgggaagtgaaattgatgactttatgggtgccgtacaagggacagttttgctgtctcat
gctgacttgtttgtccacgggtttattcaccaagcggagccctcagtcaggctgaggtcg
gtccatgcagcggacagcaggcacccgcgcatgctgctctgcactggatacggcttttat
cccaaacaaatcagagtgatgtggctgaggaatggaaataatgtcacgtccgatgtgacg
tccactgaagagctgtccaatgggaattggctctaccagatacactcgtatctggaattt
acacccagatctggaggggaaatctcctgcgtggtggagcatgccagcctcacgcaaccc
aaggtttatgattgggatgcagcaaaagaatcacagctgaacagaatagctctcgggacg
tcagggttgctgctgggtctgttgtttnttgggctcatttactacaagaaggaaaatgct
ggtgagagacgggctctggagacacgtgaccggaatcaaaatctttag

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