Gasterosteus aculeatus (three-spined stickleback): 120810850
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Entry
120810850 CDS
T07457
Symbol
tnfrsf1a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1A isoform X1
KO
K03158
tumor necrosis factor receptor superfamily member 1A
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04010
MAPK signaling pathway
gat04060
Cytokine-cytokine receptor interaction
gat04150
mTOR signaling pathway
gat04210
Apoptosis
gat04217
Necroptosis
gat04920
Adipocytokine signaling pathway
gat05132
Salmonella infection
gat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120810850 (tnfrsf1a)
04150 mTOR signaling pathway
120810850 (tnfrsf1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120810850 (tnfrsf1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120810850 (tnfrsf1a)
04217 Necroptosis
120810850 (tnfrsf1a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
120810850 (tnfrsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120810850 (tnfrsf1a)
09171 Infectious disease: bacterial
05132 Salmonella infection
120810850 (tnfrsf1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
gat04050
]
120810850 (tnfrsf1a)
04090 CD molecules [BR:
gat04090
]
120810850 (tnfrsf1a)
Cytokine receptors [BR:
gat04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
120810850 (tnfrsf1a)
CD molecules [BR:
gat04090
]
Proteins
120810850 (tnfrsf1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
DUF3290
Motif
Other DBs
NCBI-GeneID:
120810850
NCBI-ProteinID:
XP_040021740
UniProt:
A0AAQ4RBU2
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All DBs
Position
XX:7748546..7756038
Genome browser
AA seq
396 aa
AA seq
DB search
MMAADGLAGRLTKKNLAGTILLLLMCMSIPTLTLSEPPEELCPHGDYETDKGICCNKCSR
GQKLLEDCNAKGQRSKCVTCPDKEYTDQENYSPNCNRCGTCKVSKNEVTVSACQKTQNTV
CRCKDGYYKKAIDSEAYECLRCTSCGEKEKEKRTCTPEKNTECECIENYYRAKGKCTPCM
NCTAECRHHCSTSLPVTTKASTNDQYLNKIIAVFAFIAPVSVMVVVLVTYVATKRFTKKK
LLKRSNLPSDGSPDPCEQVLVHSEEPSDNMGVTAVPQSPVGEQEPSNLPDCIPLEIKTPD
LIYTVLDLVPVLQVKQLVRSLGVKDAEIEQAEMDHRSCREAHYQMLRVWAERGSHAGAGG
RGGMMHWHLLQELLDEVRKMHLGHAAEELETKYGIQ
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcagatgggcttgcaggaagattgaccaaaaagaaccttgctggcacaata
ctgctcctccttatgtgcatgtccatccccactctgacattgtcagagcctccggaggag
ttgtgtccacacggggattatgaaactgataagggaatttgttgcaacaaatgctctcga
ggtcaaaagcttttagaagattgtaatgcaaaaggtcagagaagtaagtgcgtaacctgt
cctgacaaagaatatacagaccaggaaaactactcccccaactgtaatcgttgcggaacc
tgcaaggtatcaaagaatgaagtgacggtgtcagcatgtcaaaaaacccaaaacactgtc
tgtcgctgtaaagacggttattacaagaaagcaatcgactcagaggcctacgagtgtctc
cgatgtaccagctgtggggagaaggaaaaggaaaaacggacatgtacgccggagaaaaac
actgagtgtgaatgtatagagaactactacagagccaagggcaagtgtacaccctgcatg
aattgtaccgctgagtgccgtcatcactgctcaacgtcacttcctgtgactacaaaagct
tctacaaatgatcaatacctgaacaagataattgctgtatttgcatttattgctccggta
tctgtaatggtggtggttctcgtcacctacgtggccacaaagcggttcacaaagaagaag
ttgctgaaacggtccaacctaccgtccgatggctccccggacccatgtgagcaagtcctg
gttcacagcgaggaaccttcagacaacatgggtgttacagctgttccccaaagtcctgtg
ggtgaacaggagccgtccaatctgcccgactgcatccccctggaaatcaagacccccgac
ctgatctacactgtgctggacctggtccccgtgctgcaggtgaagcagctggtgcgttct
ctcggtgtgaaggatgcagagatcgaacaagcagagatggaccacaggtcctgccgcgag
gctcactaccagatgctgagggtgtgggccgagagagggtcacatgctggcgcgggaggg
agaggcggaatgatgcactggcacttgttgcaagagttgttggacgaagtgagaaagatg
cacctgggacacgcagccgaggagctggagacaaagtacggcattcagtaa
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