Gasterosteus aculeatus (three-spined stickleback): 120812131
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Entry
120812131 CDS
T07457
Symbol
fbn1
Name
(RefSeq) fibrillin-1 isoform X1
KO
K06825
fibrillin 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04350
TGF-beta signaling pathway
gat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120812131 (fbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120812131 (fbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gat00536
]
120812131 (fbn1)
Glycosaminoglycan binding proteins [BR:
gat00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120812131 (fbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
hEGF
EGF
FXa_inhibition
TB
EGF_3
Fibrillin_U_N
Plasmod_Pvs28
EGF_FBN_1st
Motif
Other DBs
NCBI-GeneID:
120812131
NCBI-ProteinID:
XP_040023890
LinkDB
All DBs
Position
II:complement(18761727..18809983)
Genome browser
AA seq
2925 aa
AA seq
DB search
MPDCKRGGRLLQLSVALVALLSLCAELGDAAEVLETEDSGTMSKQTDSRATRAKRRGGSD
VLRGPNVCGSRNNAYCCPGWKTLTGGNQCIVPICRSTCGDGFCSRPNMCTCPNGQIAPSC
GSKSVQHCNVRCMNGGSCAEDNCQCQKGYVGNHCGQPVCENGCLNGGRCVGPNRCVCTYG
FTGAQCERDYRTGPCFASVHNQMCQGQLTGIVCTKTLCCATVGRAWGHPCEMCPAQPQPC
RRGFIPNHRTGACQDVDECQAIPGICEGGNCINTVGSFECKCPAGHKFNEVSQKCDDLDE
CSNIPGLCGVGECSNTAGSYFCKCPQGYYTSSDGSRCIDSRGGYCFASLLNGRCANQNSQ
LVTKMQCCCDSGRCWSDRSTPEMCPIRGTEEYQKLCFQMPDGRVPGSPDVPGIYPILYPG
QTPGQVPGQVPVFPGQIPIQVPGQGPGPFPGQIPGQIPGQIPGQIPGQIPGQFPYPGQLP
LQPQPGPGIIQTQNITNMCQAYRTLCQNGRCIPMPSIGYRCECNMGFKLNDRGECFDADE
CERSPCAHGDCVNTPGSYICQCPAGFQTTATRTECRDLDECVANGRICNNGRCVNTVGSF
HCVCNAGFEISGDGKNCQDQDECLIRNMCLNGLCINDDGSFKCICKPGFLLDTSGRMCVD
IDECETPGMCMNGRCVNTEGSFRCECAAGMAVGLDGRVCVDTHMRSSCYGGYKRGQCVRP
LFGAVTKSQCCCASTATGIEFAYGEPCQPCPPQSSAEFLALCPSGIGTSVDGRDINECAL
DPDLCQNGVCENMVRTFKCDCNEGFEVDLTGKNCVDIDECLMNRLLCENGLCRNTPGSFT
CQCPKGYLFDPEADVCTDVDECLSSPCVNGDCRNSQGSFVCLCSLGSSLDSTGMECIETT
KSTCWLKIVNNRCEVNINGATLKSHCCATLGEAWNSPCAKCEKDPICGKGFARVKGNACE
DVDECQVFPGVCINGKCINTPGSFFCQCPPGMTVDVSGRTCIDLRMEHCYLTHDDERCGA
AIPGRQRVDACCCSVGVAWGPECDECPERGTPEYARLCPRGPGFSHRGDFLNGRPFLKDI
NECRMINSLCSNGRCRNTVGSFRCRCDNGYALDSDERNCTDIDECHISPDLCGQGRCVNT
FGDFKCECFEGYESGFMMMKNCMDIDECERNPLLCRGGECVNTEGSFQCMCPEGHEIAPD
GSACLDINECDLSDRLCRNGQCVNMVGRYQCSCDTGYKSTENRLECVDIDECTIENGGCE
TFCTNSEGSYECSCHSGYALMPDLRSCTDIDECEESAEICDGGQCSNTPGTYQCLCFDGF
MSSDDVKTCLDVDECDLNSNICLSGNCENTKGSFICHCDLGFSVRKGTTGCTDVNECEIG
AHNCDRQATCTNTAGGFKCNCSPGWIGDGLKCTDLDECSNGTHMCSNNADCLNTMGSYRC
ACKDGFSGDGFYCSDSDECAENGNLCENGHCLNLQGGFRCECDMGFVPTPEGKACKDIDE
CTFADICVHGRCQNIPGLFRCDCNVGYELDRSGGNCTDINECADPTICINGICVNIPGSY
HCNCPPDFELNPTRVGCVDTRSGSCYLDVRARGDASESLECSREIGVGVSKASCCCSHGA
GWGNPCEACPFTNSTEYKTLCPGGEGFSPNPITVILEDINECRELPGLCQGGQCINTFGS
FQCECPRGYALNAETRICEDVNECEQKGICGPGQCYNTIGNYTCICPADYMQVNGGNNCM
DMRKSFCYRNFYSDNGTCDGELTFNITKKACCCSYNMGRAWNKPCDRCPLTGTDEFPILC
GSDKWGFGIDIITGRIVDIDECREIPGVCENGVCINMVGSFRCECPIGFVYNDKLLICED
IDECQNGPVCQQNAACLNLPGSYRCECKPGYRSSPTGQCLDRNECLENPGVCNPGQCIDF
VGGYRCICPNGFKTTRDQSMCVDVDECERQPCGNGTCKNTVGSYNCLCYPGFQNSHNGDC
IDVDECSTQRGMCRNGQCVNAVGSFLCVCNDGYELTLDGRTCTDINECAVNPGTCGAGTC
LNLDGSYRCICPPGYYLHEETCEDIDECSQAPEICTFGTCSNTEGSFTCLCPEGFQVSAS
GRRCLDIRVNSCYTKFENGRCLAPKPQLTSKEECCCTGMPGQGWGDPCEICPTKGEDGYP
LLCPNEGYQQGPDDRPKDIDECLNDPCINGQCINIDGSFRCECPMGYHLDTSKVQCEDTN
ECAAGNPCGNGTCNNVIGGFECACEDGFEPGPMMTCEDINECSQNPLLCAFRCVNVVGSY
ECKCPTGYVLREDKRMCKDQNECEDGIDDCASRGMTCKNLIGTYMCICSPGYTRQPGGDG
CMDLNECLAKPAVCKNGRCENTVGSFRCRCDQGFVANPTQTECIDNREGFCFTEVLTTLC
QMTSSNRNLVTKSECCCDGGRGWGTNCELCPLPGTTQYKKMCPLGPGFTTDGRDIDECRV
MGNLCKNGQCLNTLGSYTCNCKPGYSTDISSTQCVDVDECIQAPKPCNFICKNTEGGYLC
SCPRGYILQEDGKSCRDLDECSTKQHNCQFLCVNTIGGFTCKCPAGFTQHHTACIDNNEC
ASDPNLCGSNGACQNTPGSFNCDCQRGFSLDPNGQACEDMDECDGNHRCQHGCQNLVGGY
RCSCPQGYLQHYQWNQCVDENECQNSQICGGASCHNTLGSFRCLCPTGFNYEQTGGGCSD
VNECSTSHNPCKFGCSNTDGGYLCGCPAGYFRAGQGHCVTGLGFTGGDSGAGEGGEVDDN
SLSPEACYECKINGYPKKGRKRRSSNSTQEEPQQDVQPAEKEMVSLASVDVEDTLRLHLN
VSDLGSRAHILQFTPALSALSDHVRYSIDYGNEGGYFKINQREGVSYLHLSKKKALPPGA
YSLQISSVPLYREEELAALEDRHDKDYLTGQLGDVLKMRVQIVLH
NT seq
8778 nt
NT seq
+upstream
nt +downstream
nt
atgccggattgtaagcgtggaggacggctgctgcagttgtccgtggctctggtggccttg
ctgtcgctctgcgccgagcttggagacgccgcagaggtgttggagaccgaggacagcggg
acgatgagcaagcagaccgactcccgagccaccagggccaagaggaggggagggtcggac
gtcctcagaggaccaaatgtgtgtggctcacggaacaacgcctactgctgccccggctgg
aagactctgaccggaggaaaccagtgcattgttccgatctgccggagtacatgtggagat
ggtttctgctccagacccaacatgtgcacctgccccaacggccagatcgccccatcctgt
ggatccaagtcagtccagcactgtaacgttcggtgtatgaacgggggctcgtgtgccgag
gacaactgccagtgtcagaaaggctacgtgggaaaccactgcggtcaaccggtctgtgaa
aacggttgtctcaacggaggacgctgcgtgggccccaacagatgtgtgtgtacctacggc
ttcaccggcgcccagtgtgaacgagactaccgcaccgggccgtgcttcgcctcggtgcac
aaccagatgtgtcagggccagctcacaggcatcgtgtgcacaaagactttgtgctgcgcc
acagtgggacgggcttggggtcacccctgcgagatgtgcccggcccagcctcagccctgc
cgcagagggttcataccaaaccaccgcaccggggcgtgccaagatgtggacgagtgccag
gccatccctggcatctgtgaaggaggaaactgtatcaacacagtggggtcctttgagtgt
aaatgccccgctgggcacaagttcaacgaggtctcacagaaatgtgatgatctggacgag
tgttcaaacattccaggtctctgtggtgtaggcgaatgctccaacactgccggcagctac
ttctgcaagtgtccccagggatattacacctcctcggatggatccaggtgtatagattca
cgaggtggatactgctttgctagcctgctgaacgggcgctgcgccaaccaaaactcgcag
ctggtgaccaaaatgcagtgctgctgtgacagtggacgctgctggtccgatagatccacc
cctgaaatgtgccccattcgtggaacagaggagtaccagaagctgtgcttccagatgcct
gatggtcgtgtcccaggaagccccgacgtgcccggcatctacccgatcctatatcccggg
caaactcctggtcaagtccctggacaggtaccagtgtttcccggtcaaattcccatccag
gtgcctggtcaagggccgggtccgtttcctggacaaattccaggccagatcccaggccag
atcccaggccagatcccaggccagatcccaggacaattcccatatccaggacaactgccg
ttacaacctcaaccaggtcccggtattatccaaacccagaacatcaccaacatgtgccag
gcctaccgcaccctctgccagaacggcaggtgtatccccatgccgagcatcgggtaccgc
tgtgagtgcaacatgggcttcaagttgaatgacagaggagagtgcttcgatgccgatgag
tgtgagagaagcccgtgtgctcacggagactgtgtgaacacgcccgggtcttacatctgt
cagtgtccagctggattccagactaccgccaccaggacggagtgccgagacctggacgag
tgtgtggccaacggccgcatctgcaacaacggccgctgtgtgaacaccgtgggaagcttc
cactgcgtctgcaacgctggattcgagatttcaggagatggaaaaaactgtcaagaccag
gacgaatgtctgatcaggaacatgtgtctgaatggactgtgtatcaatgacgatggcagc
ttcaaatgcatctgtaaacctgggttcctgctggacaccagtggacgcatgtgtgtagac
atcgatgagtgcgagactccgggcatgtgcatgaacggccgctgcgtcaacacagaagga
tccttccgctgcgagtgtgcggccgggatggcagtgggcctggatgggcgagtctgcgtc
gatacgcacatgcgcagttcgtgctacggtggctacaagcgcgggcagtgcgttcggcct
ttgtttggcgccgtgaccaagtcgcagtgctgctgtgccagcacggcgacgggaatagag
ttcgcctacggagagccctgccaaccctgcccaccacaaagctctgctgaattcctggct
ctgtgccccagtggcatcggcacaagcgtcgatggaagagacattaacgagtgcgccctg
gacccggacctctgccagaacggggtgtgtgagaacatggtgaggaccttcaaatgcgac
tgcaacgaaggcttcgaggtggacctgacgggcaaaaactgcgtcgatatcgatgagtgc
ctgatgaacaggctgctgtgtgaaaacggtctgtgcagaaacacgccgggcagtttcacc
tgccagtgtcccaaaggatacctcttcgaccccgaggcagacgtctgcacggatgtggat
gagtgtctgtccagcccctgtgtcaatggagactgtaggaacagccaagggtcctttgtg
tgtttgtgttcactcggcagttcgctggacagcaccgggatggagtgtatcgagactact
aagagcacctgctggctgaagatagtcaataaccgctgtgaggtcaacatcaacggggcc
acactgaagtcccactgttgtgccacactgggagaagcctggaacagcccgtgtgccaaa
tgtgaaaaggatccgatctgcggcaaaggcttcgccagagtcaaaggaaacgcctgtgaa
gatgtggacgagtgccaggtgttccccggcgtgtgcatcaacgggaaatgcatcaacaca
ccgggctccttcttctgccagtgccctccggggatgactgtggacgtgagcggcaggacc
tgcatcgacctgcgcatggagcactgctacctcacccatgacgacgagcgctgcggggcc
gccatcccggggaggcagcgcgtggatgcctgctgctgctcagtgggcgtggcctggggc
cccgagtgcgacgagtgtcccgagaggggcaccccggagtacgcccggctctgcccccgc
ggcccgggcttctcgcacaggggggacttcctcaacggcagacccttcctcaaagatata
aatgaatgcagaatgataaacagcttgtgctcaaatggaaggtgtagaaacaccgtcggg
agcttccggtgtcggtgtgataacggctacgctctggactcggatgagaggaactgcacc
gacatcgacgagtgccacatctctccggacctgtgcggacagggcagatgcgtcaacacg
ttcggagactttaaatgcgagtgcttcgaaggttacgagagcggcttcatgatgatgaag
aactgcatggacatcgatgagtgtgagaggaaccctctgctgtgccgcggaggtgaatgt
gtaaacacagagggcagcttccagtgtatgtgccccgaggggcacgagatcgcgcccgat
ggctcggcgtgtctagatatcaacgaatgtgacctgagtgacaggctgtgcaggaacggc
cagtgtgtcaacatggtcggccgctaccagtgttcctgcgatacgggatacaaatccaca
gagaacagactggagtgcgtcgacatcgacgagtgcaccatcgagaatggcggctgtgag
actttctgcaccaactcggagggaagctacgagtgcagctgccacagcggatacgccctg
atgcccgacctgagaagctgcaccgatattgatgagtgtgaggagagcgccgaaatatgt
gacggaggccagtgcagcaacaccccggggacgtaccagtgcctgtgctttgacggtttc
atgtcgtccgacgacgtgaagacctgcctggatgtggatgagtgtgatctgaactcaaac
atctgtctgagcgggaactgtgagaacacgaagggatccttcatctgccactgtgacctg
ggcttctccgtccgcaagggaaccaccggctgcacagatgtcaatgagtgtgagatagga
gcccataactgtgacagacaggccacctgcaccaacacggccggaggcttcaaatgcaac
tgttctccaggatggatcggcgacggcctcaaatgcacagacctggatgagtgctcaaat
gggacccacatgtgcagcaacaacgccgactgtctcaacaccatgggctcctaccgctgc
gcgtgcaaggacggattctctggagatggattctactgctcagacagcgacgagtgtgcg
gagaacggcaacttgtgtgagaatggccactgtctgaacctgcaaggaggcttccgctgt
gaatgtgacatgggcttcgtgccgactcccgaaggaaaggcctgcaaggacatagacgaa
tgcacctttgctgacatctgtgtccacggacgttgccagaacatccctggacttttcaga
tgtgattgtaacgttggttatgaactggacaggagtggaggcaactgcacagacattaac
gagtgtgcagacccgacaatctgtattaatggaatatgcgtcaacatccctggaagctac
cactgcaactgccctccagacttcgaactcaaccccactcgggtgggctgtgtagacact
cgctccgggagctgctacctagatgtccgtgcccgaggagacgcgtcggagagcttggaa
tgctccagggagattggagtcggtgtttccaaagcgtcgtgctgctgttcccacggcgca
ggctgggggaatccctgtgaagcgtgtcccttcacaaactcaacggagtacaagacgctg
tgtcctggaggagaaggcttcagtccgaaccccatcactgtcatcttggaagacatcaat
gagtgccgggagctgccgggcttgtgccagggaggacagtgcatcaacacctttggcagt
ttccagtgtgaatgtccaagaggctacgccctcaacgccgaaaccagaatctgtgaagat
gtcaacgagtgtgaacagaaggggatctgtggcccgggccagtgctacaacaccattgga
aactacacgtgtatctgccccgcggactacatgcaggtcaacggcggaaacaactgcatg
gacatgaggaagagcttctgctacaggaacttctactctgacaacgggacgtgcgatgga
gagctgaccttcaacataaccaaaaaggcttgctgttgctcctacaacatgggccgtgca
tggaataaaccctgtgaccggtgccctctgaccgggaccgatgagtttccgatcctatgc
ggcagtgacaaatggggatttggcatcgacatcatcacgggacggatcgtggacattgat
gagtgcagggagatcccgggagtgtgtgagaacggagtgtgcatcaacatggtcggcagc
ttcaggtgcgagtgccccatcggcttcgtgtacaacgacaagctgttgatttgcgaagat
attgacgagtgtcagaacggaccggtgtgccagcagaacgccgcctgcctcaacctgccg
ggaagctaccgctgcgagtgtaaaccaggatatcgctccagccccacgggacagtgtctc
gaccgcaacgaatgcctggagaatcctggtgtgtgcaacccgggtcagtgcatcgacttt
gtggggggctaccgctgcatctgccccaacggcttcaaaaccacgcgggaccagtcgatg
tgtgtcgacgtggacgagtgcgagaggcagccctgtggcaacgggacctgcaagaacacg
gtgggctcctacaactgcctctgctaccccggctttcagaactcgcacaacggcgactgc
atagatgtcgacgagtgttcgacgcagagaggcatgtgtcgaaacggccagtgcgtcaac
gccgtgggcagcttcctctgcgtgtgcaacgacggctacgagctcactttggacggcaga
acgtgtacagatatcaacgaatgtgcagtgaatccgggcacgtgcggcgcggggacgtgt
ctgaatctggacggctcttacaggtgtatctgcccacctggatactacctccacgaggaa
acctgtgaagacattgacgagtgctcccaggcgcccgagatctgcacattcggaacctgc
tccaacactgagggaagcttcacctgcttgtgccccgaaggcttccaggtctctgcctcc
ggacgcagatgtttagatatccgtgtgaactcctgctataccaagttcgaaaacggccgc
tgcctggctccaaagcctcagctcacgtctaaggaagaatgctgctgtactgggatgcca
ggtcaagggtggggagatccctgtgaaatctgccccaccaagggagaggacggttatcct
ctcctttgtcccaatgaggggtatcaacaggggccagacgaccgcccaaaagacattgac
gaatgcctcaatgacccttgcatcaacggccagtgcatcaacatagacggctccttccgc
tgtgaatgtcccatgggataccatctggacaccagcaaagtccagtgcgaagacactaat
gagtgtgccgctggcaatccctgcggaaacggcacatgcaacaacgtcattggtggcttt
gagtgcgcgtgcgaggacggctttgagcctgggccaatgatgacctgtgaagacatcaat
gagtgctcccagaatcctttactgtgcgccttccgatgcgttaacgtggtgggctcgtac
gagtgcaagtgtcccaccggctacgtgctgcgcgaggacaagaggatgtgtaaagatcag
aatgagtgtgaggacggtatagatgactgcgccagcagaggcatgacctgcaaaaacctg
atcggcacctatatgtgcatctgttcccctggttacacacggcagcccggcggagacggt
tgcatggatctgaatgagtgtttagccaaaccggctgtatgtaagaatggccgttgtgag
aacacggtgggaagcttccgctgcagatgtgaccaaggattcgtcgccaaccccacgcag
accgaatgtatcgataaccgcgagggcttctgtttcacggaggttctgaccactctgtgt
cagatgacttctagtaacaggaacttggtgaccaagtcagagtgctgctgtgatggaggc
cgaggctggggaaccaactgtgagctgtgtcctctgcccgggactactcagtacaagaag
atgtgtcccctgggaccggggttcaccactgatggcagagatattgacgagtgtcgcgtg
atgggcaacttgtgcaaaaacggccagtgtctcaacactttgggctcctacacctgcaac
tgcaagcccggctacagcactgacatcagcagcacccagtgtgtggatgtggatgagtgc
atacaggcaccgaagccttgcaactttatctgtaagaacacagagggaggctacctctgt
tcctgcccccgcggatacatcctacaggaagatggaaagagctgccgagatctggatgag
tgttcgaccaaacagcacaactgtcagttcttgtgtgtgaacaccatcggcgggttcacc
tgcaaatgtcccgccggcttcacccagcatcacacggcctgcatcgacaacaatgaatgt
gcgtccgaccccaatctgtgcggctccaacggcgcctgccagaacactccgggaagcttc
aattgcgactgccagcggggattctcattggatcccaacggacaagcatgtgaagatatg
gacgagtgcgacggcaaccaccggtgtcagcatggctgtcagaacctggtgggtggatac
aggtgcagctgtccacagggatacctacagcactaccagtggaaccagtgtgtggatgag
aacgagtgccagaacagccagatctgcgggggggcgtcgtgccacaacaccctggggagc
ttccgctgcctctgccccaccggcttcaactacgagcagacgggcggcgggtgctccgac
gtcaacgagtgctccaccagccacaacccctgcaagttcggctgctccaacacggacggg
ggctacctgtgcgggtgtcccgcggggtacttccgtgcgggacaagggcactgcgtcacg
ggtctgggcttcaccgggggagactccggggccggggagggaggcgaggtggacgataac
tcgctgtcccccgaggcctgctacgaatgcaagatcaacggctaccccaagaagggacgc
aaacggcgcagcagcaactccacgcaggaggagccgcagcaggacgtgcagccggccgag
aaggagatggtcagcctggccagcgtggacgtcgaggacactctgcgcctccacttgaac
gtcagcgacctcgggagccgcgcccacatcctgcagttcaccccggccctctccgccctc
agcgaccacgtgcgctacagcatcgactacggaaacgaagggggctacttcaagatcaac
cagcgcgagggcgtcagctacctgcacctgagcaagaagaaggccctccccccgggggcg
tactccctgcagatcagcagcgtgcccctctacagggaggaggagctggcggcgctggag
gaccgacacgataaagactacctcactggacagctgggagacgtactgaagatgagggtg
cagatcgtcctccattaa
DBGET
integrated database retrieval system
