KEGG   Gasterosteus aculeatus (three-spined stickleback): 120814804
Entry
120814804         CDS       T07457                                 
Name
(RefSeq) actin, cytoplasmic 1-like
  KO
K05692  actin beta/gamma 1
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03082  ATP-dependent chromatin remodeling
gat04145  Phagosome
gat04210  Apoptosis
gat04510  Focal adhesion
gat04520  Adherens junction
gat04530  Tight junction
gat04810  Regulation of actin cytoskeleton
gat04814  Motor proteins
gat04820  Cytoskeleton in muscle cells
gat05100  Bacterial invasion of epithelial cells
gat05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:gat00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120814804
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120814804
  09143 Cell growth and death
   04210 Apoptosis
    120814804
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120814804
   04520 Adherens junction
    120814804
   04530 Tight junction
    120814804
  09142 Cell motility
   04814 Motor proteins
    120814804
   04820 Cytoskeleton in muscle cells
    120814804
   04810 Regulation of actin cytoskeleton
    120814804
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120814804
   05100 Bacterial invasion of epithelial cells
    120814804
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gat03021]
    120814804
   03019 Messenger RNA biogenesis [BR:gat03019]
    120814804
   03036 Chromosome and associated proteins [BR:gat03036]
    120814804
   03029 Mitochondrial biogenesis [BR:gat03029]
    120814804
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gat04812]
    120814804
   04147 Exosome [BR:gat04147]
    120814804
Transcription machinery [BR:gat03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     120814804
Messenger RNA biogenesis [BR:gat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     120814804
Chromosome and associated proteins [BR:gat03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     120814804
    NuA4 complex
     120814804
  Chromatin remodeling factors
   BAF complex
    120814804
   PBAF complex
    120814804
   GBAF(ncBAF) complex
    120814804
   SWR1 complex
    120814804
Mitochondrial biogenesis [BR:gat03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    120814804
Cytoskeleton proteins [BR:gat04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     120814804
Exosome [BR:gat04147]
 Exosomal proteins
  Proteins found in most exosomes
   120814804
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 120814804
NCBI-ProteinID: XP_040025810
LinkDB
Position
Unknown
AA seq 375 aa
MEDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNCPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFAQEMQTASSSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESVGLHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggaagacgatatcgctgccctggttgttgacaatggctccggcatgtgcaaagccggt
tttgccggagacgacgccccccgagccgtcttcccctccatcgtgggtcgccccagacat
cagggtgtgatggtgggcatgggacagaaggacagctacgtgggagacgaagcccagagc
aagaggggcatcctgaccctgaagtaccccatcgagcacggcatcgtcaccaactgggac
gacatggagaagatctggcatcacaccttctacaacgagcttcgtgttgcacctgaggag
catccggtccttctgactgaagctccactcaaccccaaagccaacagggagaagatgaca
cagatcatgttcgagaccttcaactgtcctgccatgtatgtggccatccaggccgtcctg
tccctgtacgcctccggtcgtaccacaggtattgtgatggactccggtgacggtgtcagc
cacacggtgcccatctacgagggttacgctcttcctcacgccatcctccgtctggatctg
gctggcagagatctgacagactatctgatgaagatcctcacggagagaggctacagcttc
accaccacggccgagcgtgagatcgtgcgagacatcaaggagaagctgtgctacgtggct
ctggactttgcgcaggaaatgcagactgcctcctcctcttcctccctggagaagagctat
gagctccctgacggacaggtcatcaccatcggcaacgagcggttccgctgccccgaggcg
ctgttccagccctcgttccttggaatggagtctgttggcctccacgagacgacctacaac
agcatcatgaagtgcgacgtggacatccgtaaggacctgtacgccaacaccgtgctgtcc
ggtggcaccaccatgtaccccgggatcgccgaccggatgcagaaggagatcaccgccctg
gccccgcccaccatgaaaatcaagatcgttgctcccccagagaggaagtactccgtctgg
atcggcggctccatcctcgcctccctctccaccttccagcagatgtggatcagcaagcag
gagtacgacgagtccggcccctccatcgtccaccgcaagtgcttctag

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