Gasterosteus aculeatus (three-spined stickleback): 120815866
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Entry
120815866 CDS
T07457
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1-like isoform X1
KO
K20894
shank-associated RH domain-interacting protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04217
Necroptosis
gat04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120815866
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120815866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120815866
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
120815866
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
120815866
NCBI-ProteinID:
XP_040026835
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Position
III:16342001..16346147
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AA seq
430 aa
AA seq
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MALSSGGWAPPAAVPSASSQPAACAAPTPCCGTVLMSVRVSVCHSGIRPLCLPGAGGEAL
RLQLGMDPSRAGEFRLALRDTSGNRSVFIAEFDLRSVQYEVKSPRCHEMRLVAPPRDCIR
FNFRCDREAEEWATVVMSSLREAHRVANMNTCESDAGRDDPAAPEPWSSASLPLTEELCL
ELAGAIEAGDARAASQHAAALARHRSALTIQPSEKNYAEGAVSLSVVVEDVSSSCCVTVK
VFPFMTVAALKQQVFLEYGFHPRVQRWVIGQCLCTEPRSLASYGVQKDGDAAYLYLISAR
QAHVTRQLFQQDLESALLAPPLPPGNGPASQDWRGYSTLPSRLAHNNQGGGSDRPGDIKD
VLDIENLQLNDHNNKGSKTRQTEWACPSCTFINKPSRPGCEICATARPELHIQQERGRRE
ERGDAASSSS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcagctccggcggttgggctccgccggccgcggtcccctccgcctcgtcccag
ccggctgcgtgcgccgccccgacgccgtgctgcggcaccgtgctgatgtcggtccgggtg
tcggtgtgccactccgggatccggcccctgtgcctccccggggccggcggcgaggctctg
cgcctgcagctcggcatggacccgagccgggccggagagttccgactggcgctgcgggac
acgagcgggaaccgcagcgtgttcatcgcggagttcgacctgcgctcggtgcagtacgag
gtcaagtccccgcgctgccacgagatgcgcctcgtcgcgccgccccgcgactgcatccgc
ttcaacttccgctgcgaccgcgaggccgaggagtgggccacggtggtgatgtcatcgctg
agggaggcgcacagagtcgcaaacatgaacacgtgtgaatcggacgccgggcgcgacgac
ccagcggctccggagccgtggagctccgcctccctgccgctcaccgaggaactgtgcttg
gagctcgccggggcgatcgaggccggcgacgcccgggccgcctcgcagcacgccgccgct
ctggcccgccacagatcggcgctgaccattcagccgtctgagaagaactacgccgaggga
gccgtcagcttatcggtggtggtggaggacgtctcgtcgtcctgttgcgtcacagtcaaa
gtctttcctttcatgacggtggctgcgctcaagcaacaggtgttcctcgagtacggcttc
catccccgcgtgcagcgctgggtgatcggccagtgcctgtgcaccgagccgcggtcgctg
gcctcctacggcgtgcagaaggacggcgacgcggcctacctgtacctgatctccgcccgg
caggcgcacgtcacccgccagctgttccagcaggacctggagagcgccctgctcgccccg
ccgctcccaccgggcaacggccccgcctcccaggactggaggggctacagcacgctgccc
tcgaggctcgcccacaacaaccagggtggtggaagcgaccgaccaggggacataaaagac
gtcctcgatatcgagaatctgcagctgaacgatcacaacaataaaggcagtaaaacacgg
cagacggagtgggcgtgtccctcgtgcaccttcatcaacaagccgtcccggccgggctgc
gaaatctgtgcgacagccagacccgagctgcacatccagcaggagcgagggaggcgagag
gagcgaggagacgccgcttcaagcagcagctga
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