Gasterosteus aculeatus (three-spined stickleback): 120816034
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Entry
120816034 CDS
T07457
Name
(RefSeq) rap guanine nucleotide exchange factor 4-like isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04081
Hormone signaling
gat04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
120816034
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
120816034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120816034
Membrane trafficking [BR:
gat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
120816034
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
PH_38
RA_2
RA
PDC10_C
Motif
Other DBs
NCBI-GeneID:
120816034
NCBI-ProteinID:
XP_040027208
UniProt:
G3PRT7
LinkDB
All DBs
Position
3:complement(7940682..7959378)
Genome browser
AA seq
996 aa
AA seq
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MVAVQTSLSSSPLAEWIRCLDKRPSERSGEDVDIILTRLREVKAFHRFPPALLLQICACA
FYECLEKGITLFRQGDIGTSWYAVLSGSLDVKVSETANHQDAVTICTLGIGTAFGESILD
NTPRHATIVSRETSELLRIEQREFKSLWEKYRQSLAGLLAPPYGAMESGSNNDRLSDKDN
MNSDSANKAHNKIPSEKLQRAGKVLRNAILSRAPHMIRDRKYHLKTYRQCCVGTELVDWL
VLQSACVLTRSHAVGMWQALLEEGVLNHVDQELGFQDKYLFYRFLDDEEEDTPLPSEEEK
RESEEELPETILLLAQIGPDALLRMILRKSPGQRTGDDLEIIYDELLHIKALAHLSNTVK
RELASVVIFESHAKAGTVLFNQGEEGTSWYIIQKGSVNVVIYGKGVVCTLHEGDDFGKLA
LVTDSPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHEQAVLVLEKSPRAST
LGSIKYTVISGTPEKILEHFLEAMRMDIHHSEPDPAVDDFVLMHGVFMPNSQLCPLLLAH
YHTTSPPGSEQERLEYALNSKRRALILALRWASTQTYLLQEEPAAISFLEELYGSLSNDS
RILRALKDFVPDLEKIVKSHSEEAKSMKKKTLIRQFSNGEERLQKKQPIRNHDDILLKVY
CGDHTYTTIRVAVAATGREVISAVADKLGTTDELVLLHLSSACEKQILKQNDVSVFSALS
INGRLFACPRDQLGSLTPLPDQEGPSAGSMSTFELMSSKDLAYQMTLYDWELFSCVHEHE
LLYHTFGRASFRRTTANLDLFLRRFNQVQLWVVTEVCLCSQLSKRVQLLKKFIKIAAHCR
EFKNLNSFFAIIMGMSNPAVSRLSQTWEKLPTKFKKFYAEFESMMDPSRNHRSYRLTVTK
LEPPIIPFMPLLLKDMTFTHEGNKTFIDNMVNFEKMRIIANTIRQVRHCRSQPFNPEICQ
PNKNQADVRGYVRKLCVIDNQRALTQLSYRMEPRRT
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcggtgcagacgtccctcagctcgtctccgttggcggagtggatccgctgtctg
gataagaggccctcggagcgctctggagaggatgtggacattatcctgaccagattgaga
gaggtcaaagccttccacaggttcccacctgcgctcctgctgcagatctgtgcttgtgcc
ttctacgaatgcctggagaaaggcatcacgttgttccgacagggtgacattggcaccagc
tggtatgctgtcctgtctggctctctggatgtcaaagtgtcagaaactgccaaccaccag
gatgcagtcaccatttgcacccttgggattgggacggcgttcggggagtccatcctggac
aacacgccacggcacgcaacaattgtcagcagagagaccagtgagctgctccgtatcgaa
cagagggaattcaagagcctctgggagaagtatcgtcagagcttggccggactgttggcc
cctccttatggagctatggagagcgggtccaacaatgacagactctctgacaaagacaac
atgaactcagactccgcaaacaaagcccacaacaagatcccttcagagaagctgcaaaga
gcagggaaggtcctccgtaacgccatcctgtccagagccccacacatgattcgagacagg
aagtaccacctcaagacgtacagacaatgctgtgtaggcacggagctggttgattggttg
gtgctgcagagtgcctgtgttctcacacggtcccacgccgttgggatgtggcaggcacta
ttggaggaaggggtgctcaaccacgtggaccaggagctgggtttccaggacaagtacttg
ttctatcgttttcttgatgatgaggaggaggacacaccgttgcctagtgaggaggagaag
agggagagtgaggaagagctgccagagaccatcctcctcctcgctcagattggccctgac
gctctgctgcgcatgatcctcaggaaatcgcctggtcagaggacaggcgatgacctagag
atcatctacgacgagctgcttcacatcaaagccttagctcacctctccaacactgtgaag
agggaactggcgagcgttgtgatcttcgagtcgcatgcaaaagccggaaccgtgttgttc
aaccaaggagaggaaggcacgtcgtggtacatcatccagaaaggctctgtcaatgtggtc
atctacggcaagggtgttgtgtgtacgctccatgagggtgacgacttcgggaagttggcc
ctggttacagattcacctcgtgccgcctccatcgtgctgagagaggacaactgtcacttc
cttcgtgttgacaaggaagacttcaacaggattctcagggatgtggaagccaacacagtg
cggttgaaagagcatgaacaagctgtgctggtgttagaaaagagccctcgcgcctccacc
ctgggaagcatcaagtacactgtgatatcaggaactccagagaagattcttgagcacttc
ctggaggccatgaggatggacattcatcacagtgaaccagacccagcagtggatgatttt
gtcctcatgcacggtgtcttcatgcccaacagccagctgtgtcctctactcctggcacac
taccacacgacatctccacccggctccgaacaggagaggctggaatatgcactcaacagc
aagaggagggccctcattctggccctccgctgggcctccacacagacgtacctgctacag
gaagagcccgccgccatctccttcctcgaggagttgtacgggagtctatcaaatgattct
cggattttgagggctttgaaagactttgttccggatcttgagaaaatcgtcaaatctcac
tcggaagaagcaaaatctatgaaaaagaaaactctcatacgacagttcagcaacggggag
gaaaggctgcagaagaagcagcccattaggaaccacgatgacatcttgttgaaggtgtac
tgcggcgatcacacgtacaccactatccgcgttgccgtggcggcgactggaagagaggtg
atcagcgctgtggccgacaaactcggcaccactgacgagctggtgttgctccacctgagc
tccgcatgtgaaaaacaaatcctgaagcagaatgatgtttcagtgttttctgctttgagc
atcaatgggcgattgttcgcctgtcctcgggaccagctcggcagtctgactcctcttcca
gaccaggaaggcccgtctgcaggctccatgtcaacgtttgagctgatgagctccaaagac
ctggcctaccaaatgaccttgtatgactgggagctcttcagctgcgttcatgagcacgag
ctgctctaccacacgtttggccgggcgagcttcagaagaactacggctaatctggacctg
tttttgcggaggttcaaccaggtccagctgtgggtggtcactgaggtgtgcctctgctca
cagctcagcaagagagtccagctcctgaagaagttcatcaagatagcagcacactgtcgg
gagtttaagaacctgaattcattctttgccatcattatggggatgagcaaccccgctgtc
agcaggctgagccagacatgggagaaacttcccaccaagtttaaaaagttctatgccgag
tttgagagtatgatggacccatccagaaaccaccgctcctaccgactcactgtcaccaaa
ctggaaccaccaatcatccccttcatgcccctcctcctcaaagacatgacatttacacac
gagggcaacaagaccttcattgacaatatggtgaattttgagaaaatgcgtattatagct
aacaccattcgacaagtgaggcactgcagaagccaaccgttcaatcctgagatatgccaa
ccaaacaagaatcaggcagacgtacgtggttacgtgaggaagctctgtgtgattgacaac
cagagggcactgacgcagctctcttacaggatggagcctcggcggacttaa
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