Gasterosteus aculeatus (three-spined stickleback): 120818889
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Entry
120818889 CDS
T07457
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03440
Homologous recombination
gat03460
Fanconi anemia pathway
gat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120818889
09124 Replication and repair
03440 Homologous recombination
120818889
03460 Fanconi anemia pathway
120818889
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gat01009
]
120818889
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120818889
03036 Chromosome and associated proteins [BR:
gat03036
]
120818889
03400 DNA repair and recombination proteins [BR:
gat03400
]
120818889
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120818889
Protein phosphatases and associated proteins [BR:
gat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120818889
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120818889
Multi subunit type E3
BRCC complex
120818889
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120818889
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
120818889
BRCA1-A complex
120818889
BRCA1-B complex
120818889
BRCA1-C complex
120818889
BRCA complex
120818889
FA (Fanconi anemia) pathway
Downstream FA components
120818889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
RING_XB3-XBAT31
RTT107_BRCT_5
zf-Nse
zf-RING_5
zf-RING_6
TRAF3_RING
zf-ANAPC11
zf-RING_10
zf-RING_4
PTCB-BRCT
zf-MIZ
zf-rbx1
YicC-like_C
Sina_RING
PocR
Motif
Other DBs
NCBI-GeneID:
120818889
NCBI-ProteinID:
XP_040031691
UniProt:
A0AAQ4NPY4
LinkDB
All DBs
Position
V:complement(11231164..11246708)
Genome browser
AA seq
1411 aa
AA seq
DB search
MTPQSGCLNLTALLSFRSSQLLMCSDFYFVAFKKSSMKTPTTTDVRKGISVLWETMQCPI
CLDLMTEPVSTKCDHQFCKFCMMKLLDSTKKNRTNCPVCKTKITKRSLQESPGFQRLVAG
LQDMIKAYEHDTGTNYFTGMSQQKGQPGVTEDEPCPDKLLGDTPDNVDSVNNQDPSKSHS
STIAAQNGFAKLMGLEDTSPTMTDVEGLDSGLGEAHPTSSKKISSPTDHLEPLETDISEV
VETSTHKNRRKKRLRKLEKPPLPPSLTPDEPEHRPLRMSTRKKLQKDLKPDKVHEEKKKK
SLQKVAEWLMTVPTEGSLELDKPNEDTEDSDSCSTASTKDIKIHNSDVNSRREERAKGLE
DQVFGAVYKRERRGNKVIAPPLNVLIETPATKETQIISKTRKINTVTPAGFVKETISDDK
SESDMEEEQQKTEEVDDASSDVVAKAEQTEVMEEKDKYGEGLNNLPESDQINDKVPCNVS
DSGQVDRRRSNRRTCNTLQQVDGDLQAKAKKTENRNSKNTRTERGKSAKVQKPLVLVGVK
NGETSPKARPRSEEVQVHIENYPSSEDQEIPTTRSTRRSRRLQLFTQEVQESHKKANLKA
VRAEKDRNAPKRSEEANGGNVTPATERNGCVFDQELEGIEDLESSEMPPYSGPTEAVEES
AAEVPDAEPLAEANVAPNAAEVPSSSSPADAAVDPTLVNADQDDRRLETVAHVTKCHDDE
DKNDSELDTELLLKSFKATKRKSFFFGGPNVKQSRGSDTENPRRADAEDSPPVSAERTDL
QALRGDENSPWSDFISPSNSPAQTRKPVLEKPDEETPEASDPESSCSGHGGDSSSRNGVS
SGLTPNKVSTRDIKSPRRSVAPRGLHSGLCFGAAEHLEPREPSNYSQSQPGCSARDAGRG
KETRGGTSVCSAQHLSNAEGSLTPDGLGIPTSRSGEPTSHSPAESAPRKRKRARRLESSF
ESGESGEDLPTLTEIFGKSAAPSGTEGRRGSREADGCAGAPAGGTPACPSPDELHSSQAS
VDLFGTPDECNVPANDVGVSSQFESSQFSSEVLVTQQKVEMQKELVRLEKLMALVSEVLQ
EKEDIPANEVPSETNPSRQNTDAHRLLPCDQDPGRGSDGEAAPEAERERGRRASERGGAA
ETAAQRSRPTGPGLNGSAGSKALRSSSASKTSKKDASPTDGQENKENNTPPGDGRRTKML
LVSSGLDQSEQTMVKRFAKRVGARVVSTVTPEVTHIIMHTDEHLVCERTLKYFLGIAGRK
WVVGSQWISECFRQKQLLDESAFEVRGDVVNGPDHHGPMRARTREDNNLLMKGYKICFQG
PFTDMTTDEMESMVELCGAAVVRDPILLDGNKISHQLVIVQSGSESHSSAPGNATVVTRG
WLLDTVATYTLQNYDQYTAPPAGVPVTTSAS
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgacaccacagtccggatgtcttaacctcaccgcgttgttatcttttcggtccagtcag
ctcttaatgtgctctgatttttactttgtagcttttaaaaaaagcagcatgaaaaccccg
acgaccaccgatgtcaggaaaggtatttcagtcctttgggagaccatgcaatgtcccatt
tgcttggatttaatgactgaacctgtttctacaaagtgtgaccatcagttttgcaaattt
tgtatgatgaaacttttggacagcactaagaaaaacaggacaaactgtccagtgtgtaaa
accaaaattaccaaaaggagcttacaggaaagtcctggttttcagcgacttgtagcagga
ctgcaggacatgataaaggcttatgaacacgacaccggcaccaactacttcactggaatg
tcccagcagaaagggcaaccgggagtcacagaggatgaaccgtgtcccgataagttattg
ggagatacccccgacaacgtggacagtgtcaacaatcaggatccttcaaagtctcactcc
tccaccatagcagcccagaatggatttgcaaaactgatgggacttgaagacacaagtccc
acaatgacagacgttgaaggcctggacagtggccttggtgaggcccatccaacttcgtcc
aagaagatcagcagccccacggatcatttggaaccactggaaacggacatttcagaagtt
gtggaaacgtcgacacacaaaaatagacgcaaaaaaaggctccgtaaattggagaaaccc
cccctgccgccatcgttgactccagacgagcctgaacaccgacctttaagaatgtccaca
aggaagaagctccaaaaggatttgaagcccgacaaggttcatgaggaaaaaaagaagaag
agtctacagaaagttgccgagtggctcatgacggttccaactgaaggaagtctcgagttg
gacaaacccaacgaggacacggaggattctgacagctgctccaccgcttcaacaaaagat
atcaaaatacacaacagtgatgtcaattccaggagagaggaacgggctaaaggcctcgaa
gatcaggtgtttggtgccgtctacaaacgggagcggagaggcaacaaggtcatcgctcct
ccgcttaatgttttaatcgaaacgccagcaaccaaagaaacgcaaattatctccaaaacc
aggaaaataaacactgtcactcctgctggttttgtcaaggaaacaatctctgatgataaa
agtgaaagcgacatggaggaagagcagcaaaagacggaagaagtagatgatgccagcagt
gacgtagttgcaaaagcggaacagactgaggttatggaggaaaaagataaatatggagaa
gggttaaacaacctgccagaaagtgaccaaatcaatgacaaagttccctgtaacgtgtct
gacagtggacaggtggacaggaggaggtcaaacagaaggacatgtaacactctgcagcag
gtcgacggggatttgcaagctaaggcaaagaaaacggagaataggaatagtaaaaacaca
aggacggaaagaggcaagtctgctaaagtgcagaaaccccttgttctggttggagttaaa
aatggagaaaccagtcccaaggccaggccgaggtcggaagaagttcaagttcacattgag
aattacccgagcagcgaagaccaagagatccctacaacgaggagcaccaggaggagcaga
agacttcaactcttcactcaggaagtccaagagagtcacaagaaagcaaacctgaaagcc
gttagagctgaaaaagaccgaaatgctccaaagcgatccgaggaagccaacggtggaaac
gtgacaccggcgactgaaagaaacggatgtgtttttgatcaagagttagaagggatcgaa
gacctggagtccagtgagatgccgccttattcgggaccaacggaagccgttgaagagtcc
gccgccgaggtgccggatgctgaaccgttggccgaagcgaacgttgcgcccaacgctgcc
gaagtcccgagctcctcgagtccggccgacgccgcggtggatccaacgctcgtaaacgcc
gaccaggacgatcgtcggttggaaactgtcgctcacgtgactaaatgtcacgacgacgag
gacaagaacgacagcgagctggacaccgagctgctgctcaagagcttcaaagccaccaaa
agaaaatcgttcttctttggcggcccaaatgtgaaacaaagccgcggttcagacaccgaa
aacccgcggcgcgccgacgcagaggacagcccgccagttagcgctgaaagaaccgacctg
caggcgttgagaggcgatgaaaactccccttggagcgatttcatctccccttctaattct
cccgctcaaacaagaaagcccgttctcgagaaaccagacgaagagacgccggaggcctcc
gaccccgagagcagctgctcaggtcacgggggcgactcttcctccaggaatggtgtcagc
agtggcctcactccgaataaagtgtcaacgcgggatatcaaaagcccccgtcgctcggtt
gcgcctcgagggctccattccggcctctgcttcggagcggccgaacacttggagccacgt
gagccctcgaactattctcagagtcagccgggctgctccgcgagggacgccggccgaggg
aaggagacgaggggaggcacctctgtctgcagcgctcaacatctctcaaatgcagagggt
tccttaacccccgatggcctcggaataccgacgtcgcgcagcggagagccgacctcccat
tcgccagcggagagcgcgcccaggaagaggaagagggcgaggaggctggagtcttccttt
gagtccggcgagagcggggaggatttgccgactttgacggaaatcttcggaaagtcggcg
gctccctccgggacggagggtcggcgggggtcccgggaggctgatgggtgtgcgggtgcc
ccagccggcgggacgccagcgtgccccagccccgacgagcttcattccagccaggcgtcc
gttgacctgttcggcacgccggacgaatgtaacgtcccagcgaatgacgtcggtgtttcc
tcacagtttgaatcatcacaattttcaagtgaagtcctcgttacgcagcaaaaggtggaa
atgcagaaggagctggtgaggctggagaagttgatggctctggtgtcggaggtgcttcaa
gaaaaggaagacattcctgcaaacgaagtcccctcagaaacaaatcccagcagacaaaac
acagacgctcacaggctcctcccatgcgaccaggacccgggccgagggtcagacggagaa
gctgctcccgaagccgagcgagagcgcggcagaagagcgtcggagcgcggcggcgcagca
gagacggccgcccagaggtccagacccacagggccgggcctaaacggcagcgcgggctcc
aaggcactccgttccagctcagcttcaaaaacatcaaagaaagacgcttcacctacagat
ggtcaagaaaacaaagaaaataatactcctccgggagacgggagacgaaccaagatgctg
ctggtgtcgtccggattggaccaaagcgaacagacgatggtcaaaaggtttgccaaacgt
gtcggcgcccgtgtggtttctacggtaacgccggaggtgacccatatcataatgcacaca
gatgaacacctggtatgcgagcgcacgctcaagtacttcctcggcatcgcgggcaggaag
tgggtggtgggctcccagtggatttcagagtgcttcagacaaaagcagctcttagatgag
agcgcctttgaggtgagaggagacgtggtgaatggacccgaccaccacggccccatgaga
gctcgtaccagggaggacaataacttgctcatgaaaggctacaagatctgcttccaaggg
ccttttacagacatgacgacagatgaaatggagtcgatggtggagctctgtggagcagct
gtagtcagagatccaattctcctcgacggtaacaagatctcccatcagcttgtcatcgta
cagtctggatcagagtcacacagcagtgcccctggaaacgctacagtggtgacacgtggt
tggctgttggataccgtggcaacctacaccctccaaaactacgaccagtacacagcacct
ccagccggtgtgcctgttacaacctctgcctcttaa
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integrated database retrieval system
