Gasterosteus aculeatus (three-spined stickleback): 120819560
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Entry
120819560 CDS
T07457
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120819560 (scn4aa)
Ion channels [BR:
gat04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
120819560 (scn4aa)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
A_deaminase_N
Motif
Other DBs
NCBI-GeneID:
120819560
NCBI-ProteinID:
XP_040033019
LinkDB
All DBs
Position
V:complement(7057397..7075045)
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AA seq
1458 aa
AA seq
DB search
MLFFVVIIFLGSFYLINLILAVVAMAYEEQNQATQREAVEKEEEFQQLLEQLKNQEEAKA
LGSRATLTSKESLSRHTISELTEDEQSLERDEIIKDCNGRIIPRLLVRVPTMVQSAEVYE
LREKSLGSVHSMHHLEEPGLTRRTASALTVLTVAALEELEEAQRPCPPAWYKFADTFLKW
DCHPQWVRCKKWVLFVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFDHMLSVGNLVFT
GIFTAEMFFKLIAMDPYYYFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK
LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKECVCKISSDCE
LPRWHMNDFFHSFLIVFRILCGEWIETMWDCMEVAGTGMCLVVFMMVMVIGNLVVLNLFL
ALLLSSFSGDNLSTGDEDGEMNNLQIAIGRITRGVEWFKAFVVRTVLRILGKKRNEAGED
ETRDEDPKMETLEMNHMDAGQSFKMSDGIHNCLVDGRPSGFIVDEKVSIDVPIAHAESDF
ENLSEDDDGTDDSEVSDEDKYQGNLEDESGMQRNVKLMGALNDGDSSVCSTVDYQPPEPE
PEEEEEEEPDPVEPEACFTDECVRRWPCLSVDITQGKGKKWWNLRRACFTIVEHDWFETF
IVFMILLSSGALAFEDIYIEKRRTIKIILEFADKVFTYVFIIEMLLKWVAYGFKTYFTNA
WCWLDFFIVDISLISLAANWMGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGA
IPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYRCVNTTTGELFPMTQVNNRSDCMAVKEAT
RDARWVNVKVNYDNVGQGYLSLLQVSTFKGWMNIMYAAVDSREVEEQPSYEINLYMYIYF
VIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGDKDLFMTEEQKKYYEAMKKLGSKKPQKPI
PRPTNLIQGLVFDFISQQFFDIFIMVLICLNMVTMMVETDNQSAEKDDFLFKVNVAFIVV
FTGECTLKLFALRQYFFTNGWNVFDFVVVILSIAGTMLSDIIEKYFVSPTLFRVIRLARI
GRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEAGIDD
VFNFETFGGSIICLFEITTSAGWDGLLLPMLNKEFPDCDPDIENPGTGVKGNCGNPLMSM
TFFCGYIIVSFLVVVNMYIAIILENFNAAQEESGDALCEDDFEMFNETWEKFDLDATMFI
EYGRLSDFCDALQQPLRVAKPNRLRLIEMDLPLVIGDRIHCLDVLLAVTQMVLGDTVEMA
AMRESIQAKFILSNPTSDSFAPITTTVRHKEEQAAAAVVQRAFRRHLLRRCVRHAALMHR
RKTAGGKEGGDDQPDEDDLLARRMRVLYGSDTGAPGGPDDHETNVAGVPVEMSGEVLLHS
APDPHLCTLHAYLRETMV
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgctgttctttgtggttatcatctttctgggctccttctacctcatcaatctgatcctg
gctgtggtggccatggcgtatgaagaacagaatcaggccactcagcgagaggccgtggag
aaagaggaggagttccagcagctactggagcaactcaagaaccaggaagaggctaaagct
cttgggagccgggccactctaaccagtaaggaatcgctgagtcgtcacaccatttctgag
ttgacagaggatgagcagagccttgaacgtgacgaaatcatcaaggattgcaacgggaga
attattcctcgtctgttagtcagagtgcccaccatggtccagtcggccgaagtttacgaa
ctgagagagaagtctttaggctccgtgcacagcatgcatcatctggaggaaccgggtctg
actcggaggaccgcgagtgctctgacggtgctcaccgtggctgctttggaagagttggag
gaggctcagaggccgtgcccacccgcctggtacaagtttgctgacacgttcctgaagtgg
gactgccacccgcaatgggtgcgctgcaaaaagtgggtgctctttgtggtgatggacccc
tttgttgacttgggcatcaccatctgcatcgtgctcaacaccctcttcatggccatggag
cattaccccatgaccgaggagtttgaccacatgctctccgtggggaatctggtcttcact
gggatattcacagccgagatgttcttcaagctgatcgccatggatccctactactacttt
caagtcggctggaacattttcgacagcatcatcgttaccctcagtctggtggagctgggg
ctggcaaacgtccagggcctgtccgtcctcaggtccttccgtctgctccgtgtcttcaaa
ctggcaaagtcctggcccacgctcaacatgctgatcaagattatcggcaactcggtggga
gctttgggaaacctgacgttggtgctggccatcatcgtcttcatcttcgccgtggtgggt
atgcagctctttggcaagaactacaaggagtgcgtgtgcaagatctcctcggactgcgag
ctgccgcgctggcacatgaacgacttcttccactcgttcctcatcgttttccgcatcctg
tgtggggagtggatcgagaccatgtgggactgcatggaggtggccgggactgggatgtgc
ttggttgtcttcatgatggtcatggtcattggaaatctcgtggtgttgaacctttttctg
gccttgctgctcagctcgttcagcggggacaacctctccaccggggacgaagacggggag
atgaacaatctccagatcgccatcggcaggatcacgcgaggcgtcgagtggttcaaagcg
tttgtcgttcgaaccgtccttcggattctgggcaaaaagcgcaatgaggcaggggaggac
gagacgcgtgacgaggaccctaaaatggagacattggaaatgaaccacatggacgccggt
cagagtttcaaaatgtccgatgggatacataattgtttagttgatggccggccgtctgga
ttcattgtggacgaaaaggtcagcatcgacgtgccgatcgctcatgccgagtcagacttt
gaaaacctgagcgaggacgacgatggtactgatgactcagaggtatcagacgaggacaag
tatcagggaaacttagaagatgaaagtggcatgcagcgaaatgtcaaactgatgggtgct
ttgaatgatggggattcttcagtgtgtagcacggtggactaccagccacccgagcccgaa
ccagaggaagaggaggaagaggagccggatcccgtggagccggaggcctgcttcaccgac
gagtgtgtgaggcgctggccgtgtctgtcggtggacatcacccagggtaaaggcaagaaa
tggtggaacctccgcagggcttgcttcacgattgtggagcacgactggtttgaaaccttc
atcgtcttcatgatcctgctcagcagcggagctctggcctttgaggatatatacatagag
aaacgccgaacaatcaaaatcattttggagttcgctgacaaagtgttcacctacgtcttc
atcatcgagatgctccttaagtgggtggcatacggcttcaagacctacttcacaaacgct
tggtgctggttagactttttcattgtagatatttccctgattagtttggctgccaactgg
atgggatactccgacctcggacccatcaagtccctcaggactctcagggcactgaggccc
cttcgtgcgctgtcgagatttgaagggatgagggtggtggtgaacgctctggtcggagcg
attccctccatcttcaacgtgctgctggtgtgcctcatcttctggctcatcttcagcatc
atgggagttaacctgtttgccgggaagttctaccgctgcgtcaacaccaccactggggag
ctgttccccatgacgcaggtcaacaacaggagcgactgcatggccgtcaaggaggccacg
cgggacgcccgctgggtcaacgtcaaggtcaactatgacaacgtgggacaaggttacctg
tccctgcttcaagtgtcgaccttcaaaggctggatgaacatcatgtatgccgccgtcgac
tcaagagaggtagaggagcagccttcttatgagatcaacctctacatgtacatttacttt
gtcatcttcatcatcttcggctctttcttcacactcaacctcttcattggtgtcattatt
gacaactttaaccagcaaaagaagaagtttggagacaaagacctcttcatgaccgaggag
caaaaaaagtactacgaagccatgaagaaacttggatccaagaagccacagaagccaatt
ccacgtccaacgaacctgatccaggggctggtgtttgatttcatcagtcagcagttcttt
gacatcttcatcatggtgctcatctgcctcaacatggtgaccatgatggtggagacggac
aaccagagtgcggagaaggacgatttcctcttcaaagtaaacgtggcgttcatcgtggtg
ttcaccggcgagtgcactctgaagctctttgccctgcgacaatacttcttcaccaacggg
tggaacgtttttgactttgtcgtggtcatcttgtccatagctggtacgatgctctcagac
ataatcgagaagtactttgtgtcaccaactttgttcagagtgatccgactggccagaata
ggcaggatcctgcgtctcatcaaaggagcgaagggcattcggacgcttctcttcgctctg
atgatgtcacttcccgctctattcaacattggcctcctgctcttcctcatcatgttcatc
ttctccatattcggcatgtcgaactttgcctacgtcaaaaaggaggccggaatcgacgac
gtctttaacttcgagacgttcggcggcagcatcatctgcctgtttgagatcaccacctcc
gccggctgggacgggctcctactcccgatgctgaacaaggagtttccggactgcgacccg
gacatcgagaacccgggcacgggagtgaagggtaactgcggcaacccgctcatgagcatg
accttcttctgcggctacatcattgtctccttcctggtggtggtcaacatgtacatcgcc
atcatcttggagaacttcaacgcggcgcaggaggagagcggcgacgcgctctgcgaggac
gacttcgagatgttcaacgagacgtgggagaagttcgacctggacgcgaccatgttcatc
gagtacggccggctctcggatttctgcgacgccttgcagcagccgctgagggtggcgaag
cccaaccgcctccgcttgatcgaaatggatctgcccctggtcatcggcgaccggatccac
tgcctggacgtcctgctggccgtcacgcagatggtcctgggagacacggtggagatggcg
gcgatgcgcgagagcatccaggccaagttcatcctcagcaaccccacctcggactcgttc
gcgccgatcaccaccacggtgcgccacaaggaggagcaggcggccgccgccgtcgtccag
agggccttccgcaggcacctcctgaggcgctgcgtgcgccacgccgccctcatgcaccgc
cgcaagacggcgggcgggaaggaaggaggcgacgaccaaccggacgaggacgacttgcta
gcgcggaggatgcgagtgctctatgggagtgacacgggagccccgggcgggccggacgac
cacgagacaaatgtggcgggcgttcccgtggagatgagcggtgaggtgttgttacattct
gcccccgaccctcacctgtgcaccctacacgcatatctgagggagacaatggtgtaa
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