KEGG   Gasterosteus aculeatus (three-spined stickleback): 120820363
Entry
120820363         CDS       T07457                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120820363 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gat03041]
    120820363 (smndc1)
Spliceosome [BR:gat03041]
 Complex A
  U2 snRNP components
   U2 related factors
    120820363 (smndc1)
 Complex B
    120820363 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    120820363 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR SspH PUA_4
Other DBs
NCBI-GeneID: 120820363
NCBI-ProteinID: XP_040033925
LinkDB
Position
VI:complement(12803350..12807224)
AA seq 238 aa
MSDDLTKQLSSYKAQLQQVEVALSTDQENEDLLKLQKDLQEVIDLTKDLLTSQPAESTSS
TNGSDAVPQKHGWKVGDSCLAVWKQDGQVYEAEIEEIDRENGTAAVTFAGYGNAEVIPLQ
NLKEVEEGKRSNEDGSLKPKSRKEQIAEQREYKKKKAQKKVLRMKELEQEREEQKSKWQT
FNNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYHDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcggacgacttaacgaaacagttgagcagctacaaagcgcagctacagcaagtagaa
gttgctttatccaccgaccaagaaaatgaagacctccttaaactccagaaagacttacag
gaagtcattgatttgacaaaagacctcctgacctcgcagcccgcagaaagtacttccagc
accaatggctcagacgccgtaccccagaagcatggctggaaagtgggggacagctgtttg
gcagtttggaagcaggatggacaggtgtatgaggctgagattgaggagatcgaccgggag
aacggcactgccgccgtgaccttcgctgggtatgggaatgcagaagtgattcctctgcag
aacctcaaggaagtagaggaggggaaacgttccaatgaggatggcagtctaaagcccaaa
tcaaggaaagagcagatcgcagagcaaagagagtataagaagaagaaagcccagaagaag
gttctgagaatgaaggaattggagcaagagagggaagaacaaaagtccaagtggcaaacg
ttcaacaacaaagcctactcaaagaacaagaaaggacaggttaagaggagcatatttgca
tctccagaaagcgtcaatgggaaggtgggagtgggaacgtgtggcatcgcggacaagcca
atgacccagtaccacgacacgtcgaaatacaacgtcagacatctaatgccacaatga

DBGET integrated database retrieval system