Gasterosteus aculeatus (three-spined stickleback): 120820619
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Entry
120820619 CDS
T07457
Symbol
cxcl12a
Name
(RefSeq) chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1) isoform X1
KO
K10031
C-X-C motif chemokine 12
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04060
Cytokine-cytokine receptor interaction
gat04672
Intestinal immune network for IgA production
gat04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120820619 (cxcl12a)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
120820619 (cxcl12a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
120820619 (cxcl12a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
gat04052
]
120820619 (cxcl12a)
00536 Glycosaminoglycan binding proteins [BR:
gat00536
]
120820619 (cxcl12a)
Cytokines and neuropeptides [BR:
gat04052
]
Cytokines
Chemokines
120820619 (cxcl12a)
Glycosaminoglycan binding proteins [BR:
gat00536
]
Heparan sulfate / Heparin
Chemokines
120820619 (cxcl12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
120820619
NCBI-ProteinID:
XP_040034522
UniProt:
G3NV24
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All DBs
Position
VI:9691696..9697756
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AA seq
98 aa
AA seq
DB search
MDMKLFAVVAVLTLVTYAPPSQAKPISLVERCYCRSTVNSVPKSFIRELRFIHTPNCPFQ
VIAKLKSNKEVCVNPEIRWLQQYLKNVINKMKKSKQGN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaagctgtttgcagtcgtggctgtgctcacattggtgacatatgctcctcca
tcacaagcgaagcctataagtctggtggagagatgctactgtcgttccaccgttaacagc
gtcccgaaaagcttcatccgagagctcaggttcattcacacgccaaactgccccttccaa
gtgattgccaagctgaagtcaaacaaagaggtgtgcgtgaatccagagatccgatggctg
cagcagtacctgaagaacgtcatcaacaaaatgaagaaatccaaacagggcaattaa
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