Gasterosteus aculeatus (three-spined stickleback): 120821089
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Entry
120821089 CDS
T07457
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1-like isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04530
Tight junction
gat04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120821089
09142 Cell motility
04810 Regulation of actin cytoskeleton
120821089
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120821089
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
120821089
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120821089
NCBI-ProteinID:
XP_040035424
LinkDB
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Position
I:14308226..14345126
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AA seq
1602 aa
AA seq
DB search
MGNVESQNGDHTLYRNEHGYLSRKHMSRSLRISNKQSRRSRHASSGKIEHRNSETSTRSS
STPSIPQSLADNGLEPFDETNILPDFGSPIWVDRVAMNLRPVSFHNDLANPSVHMNTMHV
TLPGPTAEEVQDEDVYAGEVTYLQKTRDCSKETASFKKKRSKSADMWRDDSLEFSLSDLS
QDHLTSTEEIIDPQESKRDFTDGKGHLQCSPTDCGDRANSLDELCSQKCPPARRQPHSRY
AKWHDTNRVIREGEDDKMISPSEEDGNSYGAYTLPCRRSHCLSEGLSSHQAAMCASMQGR
RAQTIQDVTAGEGSEYEDSGIDGVTVEAEQQSRRYKTMSASFSVCSAAGRSMFAGSDSGS
SSGGGPSECVQGVYENFRQELEMSSCQTDSLEEAGSALSDEQSTMSSTYQSDPLLSVTQG
MVRKAGRLAVKNFLVHKKNKKVESATRRKWKSYWVSLKGCTLFFYETDGRSGIDNNSIPK
HAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTCSQTELENWITAIHSACATAVAR
QHHREDTVRLLRAEIKKLEQKIDMDEKMKKMGDMQLSAVTDTKKRKTILDQIFLWEQNLE
QFHMDLFRFRCYLASLQGGELPNPKRLLAVASRPTKLAMGRLGIFSVSSFHALVAARSEN
GVRRRTQAMSRSCSKRKSRFSSLWGLDTTSKKKTKAHPSINQQVFADGREQVKNPVDGMF
DNPTKENTETEDGTVKSLPRASTESDIWVPDHLTPSWVCLPNDQPVLTIIQPGESALCVL
ETICKAYQLDPTKHYLRLKFLIENQGQFYIPKPEEDVYDLLYKEIELCCKITKVIQFDRD
ESCMIGYGFSISVVEEDGVQQLYITDVKAGGLAFAKGLNAGDEILQLNGKDSHSLNFSDM
KVAFSQASLALTVNTLPSVERRQLCYLPPRRSDAEEDSYTDIFSQSQEEILDDGVGLLLE
SSGDSLDDDSEIFSEFEGIKSTEQVAAFCRSLHDMNPSECVSSSPSPDSPFPPPATLRQL
SDADKLRKVICELVETERTYVKDLNCLIGRYLTPLQKETFLTQDELDVLFGNLLEMVEFQ
LEFLKTLEDGTRLVPDLEKLERVDQFKKILFSLGGSFLYYADRFKIYSAFCASHTKVPKV
LVKAKTDPDFKAFLEERNPKQQHSSTLESYLIKPIQRVLKYPLLLRELYSLTDPDSEEHY
HLDVAMKAMNKVASHINEMQKIHEEFGAVFDLLITEQSGEKKEFLRQVADLSMGDLLLHT
SATWINPPASLGKWKKEPQMATFVFKMAVVFVCKEGSKQKKKMGGSHRVSVSSEEKDPFR
YRHMIPTSSLQVRSLANADGEGSAVCEIVHTKSESEGRPERTFQLCCSSPESRKDFLKTV
HSILREKHRRQLLKTESLPVKQQYVPFGGKRLCALKGARPAINRAASVPTRTLGRRKLVR
NRFTIDTDIVFDGEPGQEVTSPQEPDSINRLQQETEPDKLQQAELAGDTDRWVEQQFDLE
EYEDKEVVKETDILSDEDDELCQTPGASSAEAELRAPVMALSLESEETSEGESLQSPKAS
SSPDDEQSAAANNSVEEDQKQTERDEIWVRRQQSGSSPESGT
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatgttgaaagccagaatggggaccacaccctataccgtaacgaacatggctat
ttgtcacgtaagcacatgtctcggtctcttcgcatctctaacaaacagtccaggcgctct
cgacatgcttcctctgggaaaatagagcaccgtaattctgaaacgagcacgcgctcaagt
agcacccctagtatcccacaatccctggccgacaatggcctggagcccttcgatgaaaca
aatatcctcccagactttggaagccccatctgggtggaccgtgtggccatgaacctgcgg
cctgtgtcctttcacaacgaccttgccaatccctcggtgcacatgaatacgatgcacgtg
accctacccggccccacagccgaggaggtgcaggatgaagacgtgtacgcgggcgaggtg
acgtaccttcagaaaactcgggattgctccaaggagaccgccagcttcaagaaaaagcgg
tccaagtctgcagacatgtggcgagatgacagcctggagttctcgctgtctgatctcagc
caagaccacttgaccagcacggaggagatcatagacccacaagagagcaagagggacttt
actgacggcaagggacacctgcagtgcagccccacggactgcggcgacagggccaactcc
ctggacgagctgtgtagccaaaagtgcccccccgcccgccgacagccgcacagccgctac
gccaagtggcatgacaccaaccgggtcatcagggagggagaggatgataagatgatctcc
ccttcagaggaggatgggaactcctatggtgcgtacaccctcccctgccggcgttcccat
tgcctttccgagggcctgagcagccaccaagccgccatgtgtgccagcatgcagggcagg
agggctcagactatacaggacgtcactgccggagagggtagcgagtacgaggacagcggc
atcgacggggtgaccgtggaggcggagcagcagtccaggcgctacaagaccatgtccgcc
tccttctccgtgtgctcggcagctggcaggagcatgtttgctggcagtgacagtggcagc
agcagcggcggaggacccagcgagtgtgtgcagggcgtgtacgagaactttcgccaagag
ctggagatgagctcctgccagacagatagcttggaggaggcagggtccgccctaagtgac
gagcagagcacgatgagctccacctaccaatctgacccgttgctcagcgtcacccagggg
atggtacgcaaagccggcaggctcgctgtcaagaacttcctcgtacataagaagaacaag
aaagtggaatcagccacaaggcgcaagtggaaaagttactgggtttccctgaaaggttgt
actctattcttctatgaaaccgatggccgttcagggattgacaacaacagtattcctaag
catgccgtctgggtggagaacagtattgtccaggcggtacctgagcatcccaaaaaggac
tttgtgttctgtctaagcaactccctgggagatgctttcctgtttcagacttgcagccag
acagagctggagaattggattacagccatccactcggcatgtgccaccgccgtcgcccgc
cagcatcacagagaggatacggtgcgcctgcttcgtgcagagatcaagaagcttgagcag
aagatagatatggatgagaagatgaagaagatgggagacatgcagctgtcagctgttact
gacaccaagaagaggaagacgatcctggatcaaatcttcctgtgggagcagaacctcgag
cagtttcatatggatctattccgcttcaggtgctacctggccagcctgcaaggtggagag
ctgcccaaccccaaacgtctcctggctgttgcatctcgtcccaccaagctggcaatgggc
cggctgggcatattctctgtgtcttccttccatgcactggtggcagctcgctcagagaac
ggagtgagaaggcgaacacaggccatgtctcgctcctgtagcaaacgcaagagcaggttt
tcctccctctggggtctggacaccacctcaaagaaaaaaacaaaagcccatcccagtatc
aaccagcaggtctttgctgatggcagagagcaagtgaaaaaccccgttgatggcatgttt
gataatccaaccaaggaaaatacagaaaccgaggatggaactgtgaaaagccttccacgg
gccagcacagaaagtgatatttgggttcctgaccacctcaccccctcgtgggtgtgtctg
ccgaatgaccagccagtgctcaccatcatccagcccggggagtcagcgctgtgcgttctg
gaaaccatctgcaaggcctaccagcttgatcccaccaagcactacttgagactcaaattc
cttatcgaaaaccaaggacaattctacattcccaaaccagaggaggatgtatatgacttg
ctttacaaagaaattgagctctgctgcaaaattactaaagtaatccagtttgacagagat
gaatcctgcatgatcggctacggtttctccatttcagtggtggaggaggacggagtgcag
cagctctacatcactgatgtgaaggcgggcggattagcttttgccaaaggtctcaatgct
ggggatgaaatactccagttgaacggaaaagactcgcacagtctcaacttctccgacatg
aaagtagctttctctcaagcttcgctggctttgaccgttaacactttgccatctgtggag
cgccgtcagctctgctatctgccgccccgccgctcagacgctgaggaggattcatacacg
gacatcttctcccagagtcaagaggagattctagacgacggggtgggacttctgctcgag
agctcaggagacagcctggacgatgactctgagatcttcagcgagtttgagggcataaag
agtacagagcaagtcgctgccttctgccgcagtctccatgacatgaatccctcggagtgt
gtgtcttcttcgccaagcccggactctccgttcccaccacctgcaacgctccgacagctc
tctgacgccgacaagctccgcaaagtcatctgtgaactcgtggagaccgaacgcacctat
gtcaaagatctgaattgtctcattgggagatatttaaccccactgcagaaagagaccttc
ctcacacaggatgagctggatgtgctatttgggaacttgctagaaatggtggagtttcag
ttggagtttctcaagaccctggaagatgggaccagactggttcccgatctagaaaaattg
gagcgagtggaccagtttaagaaaatcctcttctccctgggaggctctttcctgtactac
gcagaccgttttaaaatctacagcgctttctgcgccagccacactaaggtccctaaagtc
cttgtaaaagccaaaaccgatccagatttcaaggccttcctggaggagcgcaaccccaag
cagcagcactcttccaccctggagtcgtacctgatcaaacccatccagagggtgctgaag
tatcccctcctgctgagggagctctactcgctcacggaccctgacagtgaggagcactac
catctggatgttgccatgaaagccatgaacaaagtagccagccacatcaacgagatgcag
aagatccacgaggagttcggagctgtgttcgatctgctcatcactgagcagagtggtgaa
aagaaagagtttcttcgccaggtggctgatctgtctatgggggatctgctactccacacc
agtgcgacttggatcaacccccccgcctccttgggcaaatggaagaaagagccccagatg
gccacatttgtgttcaaaatggcagtcgtcttcgtctgcaaggaaggatccaagcaaaaa
aagaaaatgggtggctcccatcgagtctctgtatcttcagaggaaaaggatcccttcaga
tatcgtcacatgatcccaactagttcccttcaagtcaggtccttggccaatgcagatggc
gaaggctcggcggtttgtgagattgtccacacaaagtctgagtccgagggaaggccagag
aggacatttcagctgtgctgcagttcaccagagagtagaaaagactttctgaagacggta
cattccatcttgagggaaaagcaccgcaggcagctcctaaaaaccgagagtttacccgtc
aaacaacagtatgtgccctttggtggaaagcgcctctgtgccctgaagggagcccgtcca
gccataaatagagcagcatctgtacccaccaggacgctcggccggaggaagttggtgcgc
aaccggttcactatagacaccgacatcgtttttgacggcgagcccggacaggaagtcact
tcaccacaggagcccgactcaatcaaccggctgcagcaagagactgaaccagataagctt
cagcaggccgagttagcaggcgacacagaccgctgggtggagcaacagtttgacctggaa
gaatacgaggacaaggaagtggtgaaggagacagacatccttagtgatgaagacgatgag
ctctgccagacacccggagcgtcgtccgccgaggccgagctccgggcgccggtcatggct
ttgtccttggagagcgaggagaccagcgagggcgagagccttcagtccccaaaggccagc
agttcccccgatgacgagcagagcgccgccgccaataacagcgtggaggaggatcaaaag
caaacggagcgggatgagatatgggtaagaaggcagcagtccggttcgtccccagaatct
ggcacataa
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