KEGG   Gasterosteus aculeatus (three-spined stickleback): 120821271
Entry
120821271         CDS       T07457                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DP alpha 1 chain-like
  KO
K06752  MHC class II antigen
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04145  Phagosome
gat04514  Cell adhesion molecules
gat04672  Intestinal immune network for IgA production
gat05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gat00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    120821271
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120821271
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    120821271
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120821271
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gat04147]
    120821271
Exosome [BR:gat04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120821271
  Exosomal proteins of epithelial cells
   120821271
  Exosomal proteins of breast milk
   120821271
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 ig C2-set_3 I-set Neprosin_AP
Other DBs
NCBI-GeneID: 120821271
NCBI-ProteinID: XP_040035604
UniProt: G3Q5N7
LinkDB
Position
VII:complement(2969416..2971182)
AA seq 237 aa
MKTMKMMMMIVVLVLSGVSAYVPHEAIRISGCSDSDGEEMFGLDGEELWYADFKLGKGVS
LLPSFLDPITYPGGYEVAVAEQQFCRNNLRIDLEAYKFPLERDPPSSHMIFPKDAVELGE
KNSLICHVTGFYPAPVAFSWTKNQENATEGTSRNIPFPNNDGTFNQFSTLEFTPELGDIY
SCMVEHLALDHPLVRFYDVQMSQPSIGPAVFCGVGLTVGLLGVAAGTFFLVKRNECS
NT seq 714 nt   +upstreamnt  +downstreamnt
atgaagaccatgaagatgatgatgatgatagtcgtcctcgtcctttctggtgtttcagct
tacgttccacatgaggccattcgtattagtggctgttctgactctgatggagaggaaatg
ttcggtctggatggagaagagctctggtacgcagacttcaaactcggcaaaggagtcagt
cttctgcccagttttctggatcccataacctacccaggaggttatgaagtagctgtggct
gagcaacagttctgcagaaataacctgagaattgatctggaagcctacaagttcccacta
gaacgagatcctccttccagtcacatgatcttccccaaggacgccgtggaactgggagaa
aaaaactcgctcatctgtcatgtgactggtttctatcccgctccagtggcgttctcctgg
acgaagaaccaggagaacgccactgaaggaacgagcagaaacattcccttccccaacaac
gatggaaccttcaaccagttctccaccctcgagttcacccctgagctgggagacatctac
agctgcatggtggaacatctggccctggatcatccactggtcaggttctatgatgtgcag
atgtctcagcccagcattggcccagcggtcttctgtggagtcggtctgactgttggtctt
ctcggcgtcgctgctggaaccttcttcctcgtcaaaagaaacgagtgcagctga

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