Gasterosteus aculeatus (three-spined stickleback): 120821898
Help
Entry
120821898 CDS
T07457
Symbol
ttc3
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120821898 (ttc3)
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120821898 (ttc3)
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120821898 (ttc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
wHTH_TTC3
TTC3_9th
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
NPIP
TPR_11
TPR_1
TPR_17
zf-RING_11
TPR_19
TPR_2
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
120821898
NCBI-ProteinID:
XP_040036929
LinkDB
All DBs
Position
VII:complement(27775435..27790780)
Genome browser
AA seq
1725 aa
AA seq
DB search
MSDSDSDCEWEDQLTPKRIRKFDQILTLRPPLEVFERWIRVPPETRKDAGRRMRICVFWL
PILLQREEYSAIFCWALQLGLIPHNNELGLNNLQKISTVETILRALEKGTVEKDRTKQVV
KISNLLNLRSDGGLEEALRWLELTGEPYVSQRVRIMGDERARHTTMLFIYTEFAKYIHEM
GTDLEKTLRSLMSRPSTHLIMQSDEMKKKGNENFEKKQYEDAVLFYSKAIQYYPDNHIAY
GNRALCYIRCHKYLKAACDGKSATLIEPFWAKGHYRYCEALCSMGEVRMAIEANATAQSL
CKDDHKGMKDLEQQRLKFRDALSANVSQTMKKKNGKRTQSPNKTPWPPFVKVDKKNDPPP
QTKVPEVKPEVRQKNEKPAQSESSKNPKPSKSELSSKIGKSVASSPKKIPKMKKEPEEEQ
KQKRTPFDKAAVCKELRSMVQDAHAALADLRSRNAEEAFRKALVLLETSPAKELGLSTLD
VLLLLYGRALALTEIGQLEELVEAQTLLEKIKSFEERTFQCLVFYAVGKVFLRENRFSLA
LAQFSDSLQTVKNKITPGKLTWPLTKEIVKETQPEYLTEVLEQAIELCKFPPIPDAICRL
EKCLVPLKAEIYLTDPDFKGYIRICCCESCILEYHTACWKSLKTAFSDKNEKDFLKESCF
TPDCFGKICKIQLFRPTGLLKCEFVAAISKPLIPKKPKLNQKCSSPRKLKSKEEHKLTRK
QHKLSFQEKQAINDEILQQMEDPATHSQQKAWRLYRDPVLLQTSQNVELLREEKCLHVSD
LAAALRPWLELDSSRGNHVAERMLNLQQEPLATLRQAVDLLLERKNRVWARVLIHLLSDC
EDMNPKLSRWVIQLNNAGLNAARSFIERHAEHLEQLDLSFLLNFGPLQDAIIEKFGTRTE
LFSSSVTVTEHLKQAPPHDMRLFIWTLEEHRDKYLTCHQILDDYFDMDGHCSVIKKSENE
NKSPMKSRGRKKKAKEPRAYYVFPGTRASTPADEQDLFEDDSLSFLHPGDPFSVPSHLRE
EVADFEEQYNSRRHGGHYKMILDNNPDPTKESLYDYFALILEEHGPLEAEDPLLSGELVN
FPAVAQLKMQEAGGFESFLLESLRFIKIGSHVGLMKHAMCLQQQAPQGASLDDLDVITDP
GSVSLGPYLNGGLESALESHLDSYFPAQTDVHPFVPNPYVISSQAPPRELLPPYVLATDY
GELDLELDGGPSEMSSVTTNDGLLKKHVHVQTCHENMRGVAVNTEMYERFESCPGDINMK
QKNYRKLEKQIKKMLNGCDRVNQRHNEDIAVLEEDIQEIKANIQVTNRELALFQQKLEEE
VRKDQKEKKAYQEGLRALKMEIEELGEQQGRLSQSLQERKANFDLKLSDFLEYSNQSAAE
KMSMEEEINRCKALVTAATRRCQTAKVWMVESSRDQAVYALYTDLAIAKALLNKLDEAAQ
RYPEMEVARNIWRVNVQEVEKKISSAEALYQEQLDQVNSGRRLTEWAPPAVDGQSDSPAA
PSAAAAPPSEAASAQAPPPLRPASRTVEPQHNTVFDQSVERLAAIFPAYTRSDFMRFVQE
FRSSRGGNLSNMTIQEMVGGVTQLILDHQEKPKAAASNARTPCTAWPGVAPVWKAHGQKT
NAERNVMRSESPSKYGTLFHVPPAWQPPEQKRDTPPNALNVEDPCIICHEDMNPGNICVL
ECRHSFHDECIRSWLKENRTCPTCRDPAIISDEFPALSARRRQAP
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactctgattctgactgtgaatgggaggaccagctgactcctaaacgaataagg
aaatttgaccagattctcaccctgcgtccaccattggaggtgtttgagcgatggattcgt
gttcctcctgagaccagaaaagatgccgggcggcgaatgagaatttgtgtcttctggctt
ccaattctgctgcaacgtgaagagtacagcgccattttttgctgggctttacaattgggt
ctgatcccacacaacaatgaactaggtctgaataacctgcagaagatctcaacagtggag
acgattctcagagccctggagaaaggaaccgtggaaaaggaccggactaaacaggttgtg
aagataagcaacttgttaaacttgcgttccgatggaggtttggaagaagcattgcggtgg
ttggagctgaccggggaaccctacgtttcacaacgcgtccggattatgggcgacgagaga
gcgcgccacaccaccatgctcttcatctacacagagtttgcgaagtacattcatgaaatg
ggaaccgacttggaaaagacgctgaggtcactgatgtctcgaccatccacccatctaata
atgcaaagtgacgaaatgaagaagaaaggaaacgaaaactttgagaaaaagcagtatgag
gacgctgttctcttttattccaaagccatccaatattaccccgacaaccacatagcttat
ggaaacagagcgttatgctatattcggtgccacaaatatctaaaagcggcttgtgatgga
aaaagtgctactctgatagaaccgttctgggccaagggtcactaccgctactgtgaggct
ctgtgctccatgggagaggtcaggatggccatcgaggcaaacgccacggcccagagtctc
tgtaaagacgaccacaagggaatgaaagacttggaacaacaacgcctgaagttccgtgac
gcgctgagcgccaacgtttcacagactatgaaaaaaaaaaacggtaaaagaacgcagagc
cctaacaaaactccatggccaccgtttgtgaaagtcgataaaaagaatgatcctcctccg
cagaccaaggttcccgaggtcaaaccggaagtgagacaaaaaaatgaaaagcctgcacag
tcagaaagctctaagaacccaaaaccatctaaaagtgagctttcttcaaagattgggaaa
tcagtggccagctcaccaaagaagataccaaagatgaaaaaggaacctgaagaagagcag
aagcagaagcggacgccgttcgataaggcggccgtgtgcaaagagttgagatcgatggtg
caggacgcgcacgcggctctggctgacctacgcagccgcaacgcagaggaggccttcagg
aaggcactggtcctactggaaaccagcccagccaaggagctcggcctttccaccctggac
gtgctgttgctgctgtacggccgcgcgttggctctgacggaaatcggccagcttgaggaa
cttgtggaagctcaaacgcttctggagaagatcaagtcgtttgaggagaggacgttccag
tgtctagttttctacgctgtggggaaggtgttcctccgagagaaccggttttctctcgct
ctggcgcagttttcagattccctgcagacggtaaagaataaaataacaccgggtaaactc
acctggcctttaacgaaggagattgtcaaagagacacagccggagtatttaacagaagtt
ctagagcaggctatagagttgtgcaaattccctcctattcccgatgccatttgtcgacta
gagaaatgcctcgttccgctgaaagctgaaatctacctgaccgacccagattttaagggc
tacattcgaatatgttgctgtgagagctgcattcttgaataccacacggcctgctggaag
agcctcaagacggccttctctgacaaaaatgaaaaggattttctgaaagagtcgtgtttt
actccagattgttttggtaaaatctgtaagatccaactctttcgtccgacggggctgttg
aagtgcgagtttgtagctgccatctctaaaccactgattccgaagaagcccaaacttaat
cagaaatgctcgagtccaaggaagttaaaatcaaaagaggagcacaagctcacgaggaag
cagcataagctgtcatttcaagaaaagcaggcgataaacgacgagattctgcagcagatg
gaagacccagcgacccacagtcaacagaaagcctggcggctgtacagggatccagttctc
ctgcagaccagccagaacgtggagctgctgagggaggagaagtgcctccacgtgtccgac
ctggcggccgccctgaggccctggctggaactggactcctccaggggaaaccatgtcgcg
gagaggatgctgaacctgcagcaggagccgctggcgactctgaggcaggcggtcgatttg
ctgctggagcggaagaatcgcgtctgggctcgtgtccttatacacctactcagtgactgt
gaggatatgaatcccaaactcagcagatgggtgatccagctcaacaacgcaggtctgaac
gctgcgagatccttcatcgagcgccacgcggagcacttggagcagctggatttgtctttt
ctgctcaactttggcccgttgcaggacgcgattatagagaagttcggcacgaggacggag
cttttttcaagcagcgtgacggtgactgagcacctgaaacaagccccaccacatgacatg
agactctttatctggactctggaggagcatagggacaaatatctcacctgccaccaaata
ctggatgactattttgatatggatggacattgttcagtcataaaaaagtctgaaaatgaa
aataaatctcctatgaagagtcgaggccggaaaaagaaagccaaagagccgcgggcctat
tacgttttccccgggacgagagcttcaactccggccgatgaacaagatttatttgaagat
gattctttatcgttccttcacccgggggatccgttcagtgtaccgagtcaccttcgagag
gaagtggctgattttgaggagcagtacaacagcaggagacacggaggtcactataaaatg
attctagacaacaaccctgacccgacaaaagagagtttgtacgactatttcgctctgatc
ttggaggagcacggcccgctggaggccgaggaccccctgctgtccggcgagctggtgaac
ttccccgccgtggctcagctgaagatgcaggaggcgggcggcttcgagtccttccttctg
gaatccctccgcttcattaagatcgggagccacgtgggcctgatgaagcacgccatgtgc
ctgcagcagcaggcgccgcagggagccagtctggacgacttggatgtaataacggatccc
ggctcggtctctctgggtccttacttgaacggggggcttgaatctgctctcgaaagccac
ttggacagttattttccggcacaaactgacgttcatcccttcgtgccaaatccttatgta
ataagctcccaggcgcctccgcgggagcttctccccccttacgttttagccactgactac
ggggagctggatctggagctggatggcggaccttcagaaatgtcctcggtgacaaccaat
gatggcttattgaagaaacatgtacacgtacagacgtgtcacgagaacatgaggggtgtg
gcggtgaacacggagatgtacgagcgctttgagagctgcccgggtgacatcaacatgaag
caaaagaactacaggaagttggagaagcagatcaagaaaatgctgaacggctgtgacaga
gtcaaccagagacacaacgaagacatcgccgtcctcgaggaggatattcaggaaatcaaa
gccaatattcaagtgaccaacagggagctggctctgttccagcagaagcttgaagaggag
gtgaggaaggaccagaaggagaagaaggcctaccaggaaggactgagggccttgaagatg
gagattgaagagctgggggagcaacaggggagactttcccaaagcctccaggagaggaaa
gccaacttcgacttaaagctgagtgatttccttgagtatagcaatcagtcagcagccgag
aagatgagcatggaggaggagatcaatcgctgtaaggccttggttaccgcggcgaccagg
aggtgtcagaccgctaaggtgtggatggtggagagcagccgggatcaggccgtgtacgct
ctgtacacggacctcgccatcgccaaggctctgctcaacaaactggacgaagcggctcag
agatacccagagatggaagtggctagaaacatctggagagtgaatgtccaagaggttgag
aagaaaatctccagtgctgaggcgctttatcaggagcagctggatcaagtgaacagcggc
agaagactcactgaatgggctccgcccgcagtcgacggccagtcggactctccagctgca
ccatccgcggcagccgcccctccgtctgaagcggcgtccgctcaggctccgcctccgctc
cgacccgcgtccaggactgtggagccgcaacacaacacggtgtttgaccagtcggttgag
cgccttgccgccatcttccccgcttacacaaggtcggacttcatgaggtttgtccaggag
ttccgttcgtcccgcggtggtaaccttagcaacatgaccattcaggaaatggtcggcgga
gtgactcagctgatcctggaccatcaggagaagcctaaagctgcggcatcgaacgcgagg
actccgtgcaccgcgtggccgggggtcgccccggtctggaaagcacacggacaaaagacc
aacgcagagagaaacgtcatgagaagcgagagcccgtcgaagtacggcaccctgtttcat
gtccccccggcctggcagccccccgaacaaaagagggacacaccccccaacgcactgaac
gtcgaggatccttgcatcatctgtcacgaggacatgaatcccggcaacatctgcgtgctg
gagtgccgccacagcttccacgacgagtgtatccgctcgtggctgaaggagaatagaacc
tgtcccacctgcagagatccagcaatcataagcgacgaattccctgccttgtctgccaga
agacgccaagctccgtga
DBGET
integrated database retrieval system
