KEGG   Gasterosteus aculeatus (three-spined stickleback): 120821928
Entry
120821928         CDS       T07457                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like
  KO
K06752  MHC class II antigen
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04145  Phagosome
gat04514  Cell adhesion molecules
gat04672  Intestinal immune network for IgA production
gat05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gat00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    120821928
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120821928
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    120821928
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120821928
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gat04147]
    120821928
Exosome [BR:gat04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120821928
  Exosomal proteins of epithelial cells
   120821928
  Exosomal proteins of breast milk
   120821928
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 C2-set_3
Other DBs
NCBI-GeneID: 120821928
NCBI-ProteinID: XP_040036994
UniProt: A0AAQ4PD77
LinkDB
Position
VII:397812..403066
AA seq 249 aa
MAPSFISVSLLFIGLHAADGFMEFRTDECVFNSTELKDIEFIRSSYYNKKEDTRFSSSVG
KFVGFTEQGVKYAANWNKDASYLSAMRAQKEVYCLNNVQIKYDNALTKSAEPYVRLHSET
PPGGGPLSMLVCSVYDFYPKKIIVRWTRDGRPETTGVTSTDELADGDWYYQTHSHLEYTP
RSGEKISCVVEHISLSKPLVTDWNPSMPESERNKIAIGASGLILGLTLSLAGFIYYKRKA
RGRILVPSH
NT seq 750 nt   +upstreamnt  +downstreamnt
atggctccatccttcatcagcgtctccctcctcttcatcggcctccacgcagcagatgga
ttcatggagtttaggacggatgaatgtgtctttaactccacggagctgaaggacatcgag
ttcatcaggtcttcttactacaacaagaaagaagacacgaggttcagcagctcagtgggg
aagtttgtcggcttcactgaacaaggagtgaagtacgctgctaactggaacaaagacgct
tcatatctgagtgctatgagagctcagaaggaggtttactgtctgaacaacgtccagatc
aaatatgacaatgctctgactaagtcagctgagccctacgtcaggctgcactctgagacg
ccccctggtggtggacctttgtccatgttggtctgcagcgtctatgacttctaccccaag
aagatcatcgtgaggtggaccagagacggacggccagagaccaccggggtcacttctacc
gacgagctggcagacggggattggtactaccagacccactcccacctggagtacacgccc
aggtctggagagaagatctcgtgtgtggtggagcacatcagtctgagtaaacctctggtt
accgactggaacccgtccatgcccgagtctgagaggaacaagatcgccatcggagcctca
ggactgatcctgggtctgactttgtctctggctggattcatctactacaagaggaaagcc
agaggacggatcctggttcccagtcactga

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