KEGG   Gasterosteus aculeatus (three-spined stickleback): 120821929
Entry
120821929         CDS       T07457                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DP alpha 1 chain-like
  KO
K06752  MHC class II antigen
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04145  Phagosome
gat04514  Cell adhesion molecules
gat04672  Intestinal immune network for IgA production
gat05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gat00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    120821929
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120821929
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    120821929
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120821929
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gat04147]
    120821929
Exosome [BR:gat04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120821929
  Exosomal proteins of epithelial cells
   120821929
  Exosomal proteins of breast milk
   120821929
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 ig C2-set_3 I-set
Other DBs
NCBI-GeneID: 120821929
NCBI-ProteinID: XP_040036996
UniProt: G3N551
LinkDB
Position
VII:395017..397122
AA seq 242 aa
MKTKTMMKMMVVLVLSGVFCVSADGPHKDIAIDGCSDSDGEKMYGLDGEEVWYADFKHGK
GVKPQPSFVDPIDYPAGAYELAVANQQTCRNDLKTDLEAYKDVPLEKDPPSSHMIYPKDG
VELGEKNSLICHVTGFYPAPVTFSWTKNQENVTEGSSRNVPYPNNDGTFNQFSTLEFTPK
LGDIYSCMVEHLALDHPLVKFYDVQVSQPSVGPAVFCGVGLTVGLLGVAAGTFFLIKGNE
CS
NT seq 729 nt   +upstreamnt  +downstreamnt
atgaagaccaagacgatgatgaagatgatggtcgtcctcgtcctctctggtgtcttctgt
gtctcagccgacggtccacataaggacattgctattgatggctgttctgactctgatgga
gagaagatgtacggtctggatggagaagaggtctggtacgcagacttcaaacacggcaaa
ggagtcaaacctcagcccagtttcgtggatccaatagactacccagcaggagcttatgaa
ctagctgtggctaatcaacagacctgcagaaatgacctgaaaactgatctggaagcttac
aaggacgtcccactggagaaagatcctccttccagtcacatgatctaccccaaagacggc
gtggaactgggagagaagaactcgctcatctgtcatgtgactggtttctatcctgctcca
gtgacgttctcctggaccaagaaccaggagaacgtcactgaaggatccagcaggaacgtt
ccctaccccaacaacgacggaaccttcaaccagttctccacccttgagttcaccccaaag
ctgggagacatctacagctgcatggtggaacatctggccctggaccatccactggtcaag
ttctatgatgtgcaggtgtctcagcccagcgttggaccagcggtcttctgtggagtcggt
ctgactgttggtctcctcggcgtcgctgctggaaccttcttcctcatcaaaggaaacgag
tgcagctga

DBGET integrated database retrieval system