Gasterosteus aculeatus (three-spined stickleback): 120822017
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Entry
120822017 CDS
T07457
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04110
Cell cycle
gat04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120822017 (rb1)
04218 Cellular senescence
120822017 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gat01009
]
120822017 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120822017 (rb1)
Protein phosphatases and associated proteins [BR:
gat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120822017 (rb1)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
120822017 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
Motif
Other DBs
NCBI-GeneID:
120822017
NCBI-ProteinID:
XP_040037209
UniProt:
A0AAQ4QEJ6
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All DBs
Position
VII:20330845..20349446
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AA seq
908 aa
AA seq
DB search
MPPKKRNSGTTQIKDVKSAESVSPNKKECPELSFKKHRDKDAEFVTLCKSLHVTDLVCEG
SWELCKSVQVSMDEIADGPRKVWVACLFVTATDANVASFTLTQVLKAVNLNVPQFVALVR
KLDVNMDTISSKVNSALTRVEKKYGVLLVLYQRFEKTCRNIFAPASDNPERETMRSCWTM
FLLAKGRVLQMEDDLVISFQLLLCTLELFIKRCPPDLLQPLYKSAIRKVQSPPTRTSRRS
QSKAKSRPLEPEVDLQLLKTLCNENECNGEEVKNVYQTSFLAFLESLDSSKSPDFPQAKD
LNQQYEDHYLKSRDIDGRLFFDGDETVLPSKLEILQEEKTPKKNLPDEEVLIPPQTPIRN
VMTSIRDLRGDLTSNGDQPSNNLATYFKNCTVDPTQDVLKRLETVGQDFSQKFGETVGPH
CVALGWQRFKLGVRLYYKIMEAMLKSEEKRLSVQNFSKLLNDATFHTSLLACALEVVMAT
YGESSFMTRGYNHAGAGNPVEKDLCFPWILDVVHLPALDFYKVIESFIKAEPTLSKDIVK
HLETCENLIMERIGWRRNSPVFELLKQEHGGGAADQVETPASISQPLQHNHTAADLYLSP
VRGGLRDLPPESPATPTSQTLNQPAGQTPRLPKSNSLSLFYKKLYRLAYTRLQLLCSSLL
SSHPELEPIIWTLFQHTLQHEYELMRDRHLDQLMMSAMYAICKVKGVDLRFKTIVTAYKD
MANTNQETFKHVLIADGHYDSIIVFYNQVFMQKLKTNILQYASTRPPTLSPIPQIPRSPY
KFPNSPLRVPGSNNVYISPLKSSRMSPGIMTPRSKMLVSIGESFGLPNRFQKINQMVNSG
ERSFKRCLDPGSAPKPLKRLRFDVDGQDEADSSKSGRDSALILKLAEMSSTRNRMQEQKM
KEDAESKE
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgccacccaagaagcgcaattctgggacgacacagatcaaggatgtgaaaagtgccgaa
agtgtctctccaaacaagaaggagtgtccagagttgtcttttaaaaagcacagggacaag
gatgcggagttcgtgacgctgtgtaagagcctccatgtgacggacctggtgtgcgagggt
tcctgggagctatgtaaaagcgtccaggtgtccatggatgaaatcgccgacggtccgagg
aaggtctgggttgcttgtctgtttgtgacggcgacagatgcgaatgttgctagtttcact
ttaactcaagttctgaaagcagtcaatctgaatgtaccgcagtttgtagctctggtgagg
aagttggatgtgaacatggataccatcagctccaaggtgaattcagcactcacacgagtg
gagaagaagtacggtgtgctgctggttctctaccagcggtttgagaaaacgtgcaggaac
atctttgctccggcttctgacaatccggagagggagaccatgcggagctgctggacaatg
tttcttttagcgaaaggaagggtcttgcagatggaggatgacctggtcatatcattccag
ctgctgctttgtacgctggagttattcatcaagcgttgccctccagaccttctgcaacct
ctttacaaatcagccatcaggaaagttcaaagccctccgacacgaacatctcggcgcagc
cagagcaaggccaagtcccgacctctggagccagaggtggatttgcagcttctgaagacc
ttatgcaatgagaatgaatgcaatggagaagaggtgaagaatgtataccagaccagtttc
ttggctttcctggagtctctcgactcttcgaagtctccagattttcctcaggctaaagac
ctcaaccaacaatacgaagaccactacctcaagagtagagacattgatgggcgactgttt
tttgacggagatgagacggttcttccttctaaattggagatattacaggaggagaaaacc
ccaaagaagaacctgccagatgaagaagtactcattcctccacagaccccaatcagaaat
gtcatgacttccattcgggacctgaggggggatctcacctccaacggcgatcagccatct
aataacctggctacatatttcaaaaactgcaccgtggacccgacgcaggatgtgctgaag
cgcttggagacggtcgggcaggatttcagccaaaagtttggagagacagtcggcccgcac
tgtgtagcacttggttggcagagattcaaacttggcgtcagactgtattacaaaatcatg
gaggcgatgctgaaatcggaagagaagcgactgtctgtacaaaatttcagtaaactactt
aatgacgccacatttcacacatcgctgttggcctgcgctttggaggtggtgatggcaacg
tatggagagagcagctttatgaccagaggatacaaccatgctggtgccggtaacccagtt
gaaaaagacttgtgcttcccctggatactggatgtggtccacctgccagccttagacttc
tacaaagtcatcgagagtttcatcaaggccgagcccactctgagcaaagatatcgtcaaa
cacctggagacctgcgagaacctcatcatggagaggattggatggaggaggaactcgccg
gtgtttgagctgctgaagcaggagcatggaggcggagcagcagatcaggtggagaccccg
gccagcatcagccaaccgctgcagcacaaccacaccgcagctgacctgtacctgtccccc
gtgcgtggaggccttcgtgacttgcctcccgaatccccggccacgcccacttctcaaact
ttaaaccagcccgctggccaaactccacgactcccaaaatccaactcgctcagcctcttc
tataaaaaattgtaccgcctggcgtacaccaggctgcagttgctctgctcctccctgctc
tcctcccaccccgaactggagcccatcatatggacgctgttccagcacacgctgcagcac
gagtacgagctgatgagagaccgtcacctcgaccagttgatgatgtcggccatgtatgcc
atctgtaaagtgaagggtgttgatctgcgcttcaagaccatcgtcacagcttacaaggac
atggccaacaccaaccaggagacctttaagcacgtgttgatcgccgatggccactacgac
tccatcatcgttttctacaaccaagtgttcatgcagaagctgaaaaccaacatcctgcag
tatgcgtctaccaggccacccaccctctctccgatcccacaaataccccggagcccttat
aagttccccaattcacctctacgagtgcccggcagcaacaacgtgtacatctcccctctg
aaaagctcacgcatgtcgccgggtatcatgactcctcgttccaaaatgctggtatcaatc
ggggaatccttcgggctgcccaatcggttccagaagatcaaccagatggtcaacagcggc
gaacgctccttcaagaggtgtctggatcccggctcggctccgaagcctctgaagaggttg
cggttcgacgtggacgggcaagatgaagccgacagcagcaaatctggacgagattctgcg
ctgatactgaagcttgcagagatgagctccactcgcaatcgcatgcaggagcagaagatg
aaggaggacgcagaatcgaaggagtaa
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