KEGG   Gasterosteus aculeatus (three-spined stickleback): 120822648
Entry
120822648         CDS       T07457                                 
Name
(RefSeq) RLA class II histocompatibility antigen, DP alpha-1 chain-like
  KO
K06752  MHC class II antigen
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04145  Phagosome
gat04514  Cell adhesion molecules
gat04672  Intestinal immune network for IgA production
gat05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gat00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    120822648
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120822648
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    120822648
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120822648
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gat04147]
    120822648
Exosome [BR:gat04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120822648
  Exosomal proteins of epithelial cells
   120822648
  Exosomal proteins of breast milk
   120822648
SSDB
Motif
Pfam: MHC_II_alpha C1-set Ig_3 ig Ig_2 C2-set_3 I-set
Other DBs
NCBI-GeneID: 120822648
NCBI-ProteinID: XP_040038389
UniProt: G3N575
LinkDB
Position
VII:355341..357689
AA seq 242 aa
MKTKTMMKMMVVLVLSGVFCVSADGPHKDIRVLGCSDSDGENMFGLDGEEVWYADFKHGK
GVRPLPSFVDPIEFPGGAYEQAVTDLQICRSNLKTHVKGLKDVPLEKDPPSSHMIYPKDG
VELGEKNSLICHVTGFYPAPVTFSWTKNQENVTEESSRNVPYLNNDGTFNQFSTLKFTPK
LGDIYSCMVEHLALDHPLVKFYDVQVSQPSVGPAVFCGVGLTVGLLGVAAGTFFLIKGNE
CS
NT seq 729 nt   +upstreamnt  +downstreamnt
atgaagaccaagacgatgatgaagatgatggtcgtcctcgtcctctctggtgtcttctgt
gtctcagccgacggtccacataaggacatacgtgttcttggctgttctgactctgatgga
gagaacatgtttggtctggatggagaagaggtctggtacgcagacttcaaacacggcaaa
ggagtcagacctctgcccagtttcgtggatccaatagagttcccaggaggagcttatgaa
caagctgtgactgatctacagatctgcagatctaacctgaaaactcatgtgaaaggcctc
aaggacgtcccactggagaaagatcctccttccagtcacatgatctaccccaaagacggc
gtggaactgggagagaagaactcgctcatctgtcatgtgactggtttctatcctgctcca
gtgacgttctcctggaccaagaaccaggagaacgtcactgaagaatccagcaggaacgtt
ccctacctcaacaacgacggaaccttcaaccagttctccacccttaagttcaccccaaag
ctgggagacatctacagctgcatggtggaacatctggccctggaccatccactggtcaag
ttctatgatgtgcaggtgtctcagcccagcgttggaccagcggtcttctgtggagtcggt
ctgactgttggtctcctcggcgtcgctgctggaaccttcttcctcatcaaaggaaacgag
tgcagctga

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