Gasterosteus aculeatus (three-spined stickleback): 120823518
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Entry
120823518 CDS
T07457
Symbol
pbx1b
Name
(RefSeq) pre-B-cell leukemia transcription factor 1b isoform X1
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120823518 (pbx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120823518 (pbx1b)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120823518 (pbx1b)
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Gene cluster
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
UCH
GAIN
YdaS_toxin
LZ3wCH
Motif
Other DBs
NCBI-GeneID:
120823518
NCBI-ProteinID:
XP_040039497
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Position
VIII:complement(3314171..3362977)
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AA seq
429 aa
AA seq
DB search
MDEQTRLMHSHTGVGMAGHPGLPPHMQEGTGGPDGDGRKQDIGDILQQIMTITDQSLDEA
QARKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPPDPQLMRLDNMLLAEGVSGPE
KGGGSAAAAAAAAASGGVGADNSTEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMN
LLREQSRTRPISPKEIERMVNIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFN
KQATEILNEYFYSHLSNPYPSEEAKEELAKKCAITVAQVSNWFGNKRIRYKKNIGKFQEE
ANMYAARTAVNAANASSHGSQANSPSTPNSAGSGGSFNMSNSGDLFMSVQSLNGDSYQGA
QVGANVQSQVDTLRHVISQTGGYSEALTANQMYSPQGINANGGWQDAPTPSSVTSPTEGP
GSVHSDTSN
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcagacgaggttgatgcactcgcacacgggggtgggcatggcggggcacccc
ggcctgccgccgcatatgcaggagggcaccggaggaccggacggcgacgggaggaaacag
gacattggagacattttacagcaaatcatgaccatcacggaccagagtctggacgaagct
caggccaggaaacacgctctcaactgtcacagaatgaagcctgcccttttcaatgtcctg
tgtgaaatcaaagaaaaaacagtgctgagcatccgcggcgcccaggaggaggagccgccg
gatccccagctcatgcgcctggacaacatgctgctggcagagggcgtgtccggtccggag
aaaggcggcggctcggcggcggcggcggccgcggcggcggcctcgggcggggtcggggcg
gacaactccacggagcactccgactacagggcgaagctgacccagatcagacagatctac
cacacagagctggagaagtacgagcaggcgtgtaacgagttcaccacccacgtgatgaac
ctgctgcgggagcagtcgcgcacgcggccgatttcgcccaaggagatcgagcgcatggtg
aacatcatccaccgcaagttcagctccatccagatgcagctcaagcagagcacctgcgag
gccgtcatgatcctgcgctcccgcttcctcgatgccagacggaaaagacgaaacttcaac
aagcaggcaacagagatcctgaacgagtatttctactctcacctcagtaacccctaccca
agcgaagaggctaaagaggagctggcaaagaagtgcgccatcacagttgcccaggtttcc
aactggtttgggaataaaagaatcagatacaagaaaaacattggtaagttccaagaagaa
gccaacatgtacgctgcgagaactgccgtgaatgcggctaatgcatcctcacatggaagc
caagcaaattcaccctcaactccaaactctgcaggttctggcggctcttttaacatgtca
aactccggggacttgttcatgagcgtgcagtctctcaatggggactcgtaccagggggct
caggtgggagccaacgtgcagtcacaggtggatacccttcgccatgttatcagtcagaca
ggcggatacagtgaagcactcacagccaaccagatgtacagtccgcagggcatcaacgca
aacgggggctggcaggacgctccgaccccctcgtcggtgacttcacccacagaaggaccc
ggaagcgttcactccgacacctccaactga
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