Gasterosteus aculeatus (three-spined stickleback): 120826882
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Entry
120826882 CDS
T07457
Name
(RefSeq) H-2 class I histocompatibility antigen, Q9 alpha chain
KO
K06751
MHC class I antigen
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04144
Endocytosis
gat04145
Phagosome
gat04218
Cellular senescence
gat04514
Cell adhesion molecules
gat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120826882
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120826882
04145 Phagosome
120826882
09143 Cell growth and death
04218 Cellular senescence
120826882
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120826882
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gat04147
]
120826882
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gat00537
]
120826882
Exosome [BR:
gat04147
]
Exosomal proteins
Proteins found in most exosomes
120826882
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gat00537
]
Antigens
120826882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
MHC_II_alpha
Ig_3
MHC_II_beta
Orf78
Motif
Other DBs
NCBI-GeneID:
120826882
NCBI-ProteinID:
XP_040045408
LinkDB
All DBs
Position
X:complement(2091865..2096388)
Genome browser
AA seq
342 aa
AA seq
DB search
MRLVGAEISVLSLLMMSLHGAAALTHSLKNFYTGSSGVPNFPEFVVVGLLDEVEISHYDS
NTRREEPRQDWMSRVTEDDPQYWKSETEILMGQQQGFKVNIETAKQRFNQTGGVHIYQNM
YGCEWDDETNEVKGYYQFGYDGEDFISFDLQTERWIAPKHQAFITKQKWDHNRALIAGKK
NYLTHVCPEWVKKYLNYGRSSLMRTERPSVSLLQKTPSSPVSCHATGFYPDRADLFWRKD
GEELHEDVDLGEILPNHDGTFQMRVDLKLSSVPAEDWRRYDCVFQLSGVDEDIVTKLDKT
RTNREKPAASTFIIIIIIAVAVLVVIIAAVVGFKVYRKRNGE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttgtcggggcggagatctcggttctgtctctcctgatgatgagccttcacggc
gctgcagcactgactcactcgctgaagaatttctacactggatcctctggagtcccaaac
ttcccagagtttgtggttgttgggctgctggatgaagttgagattagtcactatgacagt
aacaccaggagagaagaacccagacaggactggatgagcagagtcacagaggatgatcct
cagtactggaagagtgagactgagatccttatgggccaacagcagggcttcaaagtcaac
attgaaacagcaaaacaacgcttcaaccaaactggaggtgtccacatttaccagaacatg
tacggctgtgaatgggatgatgagaccaatgaggtcaagggttattatcagtttggttat
gatggagaagacttcatatcatttgacctgcagacagagcgatggatcgctccaaaacac
caggctttcatcaccaaacagaagtgggatcataacagagctctgatagcagggaagaag
aactacctgactcatgtgtgtcctgagtgggtgaagaagtacttgaactacgggaggagc
tctctgatgagaaccgagcgtccctcggtgtctctcctccagaagactccctcctctcca
gtcagctgccacgctacaggtttctaccccgacagagccgacctcttctggaggaaagat
ggagaggagctccatgaggacgtggacctcggagagatcctccccaaccacgacgggacc
ttccagatgagggttgacctgaaactgtcctccgtccctgctgaagactggaggaggtac
gactgtgtgttccagctgtctggtgtggacgaggacatcgtcaccaaactggacaagacc
aggaccaacagggagaagcctgctgcctccaccttcatcatcatcatcatcatcgctgtg
gctgttcttgtcgtcatcatcgctgctgtggttggattcaaggtttacagaaagaggaac
ggtgag
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