Gasterosteus aculeatus (three-spined stickleback): 120827415
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Entry
120827415 CDS
T07457
Symbol
smcr8a
Name
(RefSeq) guanine nucleotide exchange protein smcr8a
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120827415 (smcr8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120827415 (smcr8a)
Membrane trafficking [BR:
gat04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
120827415 (smcr8a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
120827415
NCBI-ProteinID:
XP_040046208
UniProt:
A0AAQ4RPG6
LinkDB
All DBs
Position
11:5507303..5514072
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AA seq
957 aa
AA seq
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MTVGCAALCVCVAHVLLNDTTMIGSPDVVAFTKEDEYGQTTPDPWALPAEFSFPLHPLAD
SNPWAKTSYAKFTKDFILISEFSEQVGPQPLLTIPDEPKVCGTFDLNYFSLRIMSVDYQA
SFVGHPPGSGYPRLSFVEDSRVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYVSAD
ERKIMLQFQELSLRFSRASECLKAGNRRAFAKELQRKLRDLEYTHSVLQREEGLQREAGP
QCMYSAHAVEKANELANVEKSIYEHRDLLRQISSYQHRPRRDPHAVTCQTCVTECLSECE
QLLDKYAKLAKPFRYTDKRGNGEEGRDQVDDEGGGEDMNEEEEGVKRRSSYTPQLIKAKS
AKCFDKRLKTLQELCDDTFYDATVEVLKETERSFRGDLCYLHTRRLDRAVRRKLRVTNFL
FEEELGDEDEDERGTIRPFCAVTHAVENFTLFNPPPIVLGPEPDVLEPPDPLDPAAVTSH
TRESELGLVESHLESSPSDQTLETQGSSEETKGSFSSDKSGMGLAERQNRACVKSEAPDS
DLTPDPDPERESSSEEMETTAGEDEGDGTPVSLLEVASELEASREDDCDGEADEACEMQS
DLLVPLDTACCMAQDGFLYEASAPEAAPPLGRSSHLQPYQTLVINQEPQALLHLQDDYAV
GSPSSGSPADGLELPVGLLGDTVSQTSVEDGCDSAMSASTGSDRAASPLGYGGVVTLRQR
KKAGQGALRFVRQYPFAIQALWCLLSGRTLVVLGADERVVRRLVAALALFVPSPGKCGER
VQAWLSCPFTLTDLQRWKLVGLQRVASPVGSSMLYSLSRYSRYISILDADHKTLRCPSYR
GHLLAKIADHRTFIRRGSTYFLHLQSALCHLAAKAFLLTFTHHLHLPVSSTEGPEVVEGR
RLCFLREQLGLGEEDGQILLYLSQLITRQYLQPPGGGRAAAPPCFSFNYTTSVLYKI
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcggttgtgctgcactgtgcgtttgcgttgctcatgtcttgctcaacgacacc
acgatgatcggctcacctgacgtggtggcgttcaccaaagaggacgagtatgggcagacc
actccggacccctgggctctccccgcggagttctccttccccctccatccgctggctgac
tccaacccctgggccaagacctcctatgccaagttcaccaaagacttcatcctgatctcc
gagttctccgagcaggtgggccctcagccgctcctcaccatcccagatgagcccaaagtc
tgcggcaccttcgatctcaactatttctccctgcgcatcatgtccgtggactaccaggcc
tcttttgtcggacatccgcctggcagcggctaccctaggctcagttttgtggaggactcc
agggtggtgctgggcgactcaaaggagggggcgttcgcctacgtccatcacctcactctt
tacgacctggaggcgaggggctttgtgcgaccgttctgcatggcgtacgtgtcggcagac
gagaggaaaatcatgctgcagtttcaggagctgtcactccgcttctcgcgggcctctgag
tgcttgaaggccgggaacaggagagcattcgccaaggaactgcagaggaagctgcgggac
ctggagtacactcactccgtgctgcagagggaggagggcctgcagagggaggcggggcct
cagtgcatgtactccgctcacgccgtggagaaggccaatgagcttgcaaatgtggagaag
agcatctacgaacacagagacctgctgaggcagatcagctcctaccagcaccgcccacgc
agagacccccacgctgtcacctgccagacgtgtgtcaccgagtgcctgagtgagtgcgag
cagctgttggacaaatacgccaagctcgccaagcccttccgttacaccgacaaacggggc
aacggggaggaaggtcgggatcaggttgacgatgagggaggtggagaagacatgaacgag
gaggaagagggcgtgaagcgcaggtcgtcctacacgccacagctgatcaaggccaagtca
gcaaagtgcttcgacaagcggctgaagaccctgcaggagctgtgtgacgatactttctac
gacgccaccgtggaggtcctgaaggagacggagaggagtttccgcggcgacctgtgttac
ctgcacactcgccgcctggacagggcggtgcgcaggaagctgagagttaccaacttcctg
tttgaggaggagctcggagatgaggacgaggatgaaaggggaacaataagaccattctgc
gctgtgacccatgctgtagagaacttcacactgttcaacccgcctcctatcgtgctagga
ccagaacctgatgtcctggagcctccagacccgctggacccagccgccgtgaccagccac
actcgtgagagtgagcttgggctcgtggagagccacctggagtcctccccttcagaccag
actctggagacccagggcagctcggaggagaccaaaggaagcttcagcagcgacaagagc
gggatgggactagcggagaggcagaatcgggcttgtgtgaagtcggaggcccccgattct
gacttgacccctgaccccgacccggagagggagagcagcagcgaggagatggagaccact
gctggagaggacgagggagacgggacgcccgtgtccttgctggaggtggcgtcggagctg
gaggccagcagggaggatgattgtgacggagaagccgatgaggcctgtgagatgcagtct
gacctgttggttcctttggacacggcgtgctgtatggcccaagatggtttcctttatgag
gcttctgccccggaggcggcgcctcctctcggccgaagctcccacctacagccctaccaa
acactggtgatcaaccaggagccccaggccctgcttcacctccaggacgactacgcggtg
ggctccccatcctcagggagccctgcggatgggctggagctgcccgttggactcctcgga
gacacagtttcccaaacctcagtggaggacgggtgtgactctgccatgagtgcttctacg
ggctccgatcgggccgcctcgcctctgggctacgggggggtcgtgaccttgcgtcagagg
aagaaggctggacaaggagccttgaggtttgtcagacagtaccccttcgccattcaagct
ctgtggtgcctgctgagcggcagaaccctggtggtgctcggggcggatgagcgggtggtc
cgccgactggttgcggctctggccctcttcgtgccgagtcccgggaagtgtggagagcgc
gttcaagcctggctgtcgtgccccttcaccctcactgacctgcagaggtggaaactcgtt
gggctgcaaagagtggcgtcccctgtgggctccagcatgctttactcgctctcccggtac
agtcgctacatctccatcctggatgccgaccacaagaccctgcgctgcccgtcttaccgg
ggtcacctccttgccaaaatagcggaccaccgcaccttcatccgccgcggttccacctac
ttcctccacctacagagcgctctctgccacctggcggccaaggccttcctgctcaccttc
acccaccacctccacctgccggtcagctccacggaggggcccgaggtcgtggagggcaga
cgcctctgcttcctgcgcgagcagctgggtctgggagaagaggacggccagatactgctc
tacctcagccagctcatcacgcggcagtacctgcagccgcccggcgggggccgggcagcc
gcaccaccttgcttcagtttcaactacaccaccagcgttttatacaaaatctga
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