Gasterosteus aculeatus (three-spined stickleback): 120828147
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Entry
120828147 CDS
T07457
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b
KO
K04359
platelet-derived growth factor subunit A
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04010
MAPK signaling pathway
gat04020
Calcium signaling pathway
gat04510
Focal adhesion
gat04540
Gap junction
gat04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120828147 (pdgfab)
04020 Calcium signaling pathway
120828147 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120828147 (pdgfab)
04540 Gap junction
120828147 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120828147 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
gat04052
]
120828147 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
gat00536
]
120828147 (pdgfab)
Cytokines and neuropeptides [BR:
gat04052
]
Cytokines
Growth factors (RTK binding)
120828147 (pdgfab)
Glycosaminoglycan binding proteins [BR:
gat00536
]
Heparan sulfate / Heparin
Growth factors/receptors
120828147 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
TraY
Motif
Other DBs
NCBI-GeneID:
120828147
NCBI-ProteinID:
XP_040047455
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All DBs
Position
XI:10906457..10924837
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AA seq
208 aa
AA seq
DB search
MRAALCYFLLWTTYLLLATSEEVEFPQELIDRLSHSEIHSISDLQRLLDIDSVGTGNNVI
EEPKHHKHHNQHKNYSRQHGYYSDLKSSQLHSRRKRSIVEEAVPAACKTRTVIYEIPRSQ
VDPTSVNFLIWPPCVEVKRCTGCCNTSNMRCHPSRKHHRTVKVAKVEYVKRRPKLKEVFV
RLEDHLECVCTSQHHVVEHSDAEIVDVR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcactttgttacttcctgctgtggacgacgtacctgctgctggccacctct
gaggaagtggagtttccccaggagctgatagacagactgtcccacagtgaaatccacagc
atcagcgacctccagcggctactggacattgactccgtaggtacgggaaacaatgtcatc
gaggaacccaagcaccacaagcaccacaaccagcataagaactactcccgtcaacacggt
tactacagcgacctgaagagctcgcagctccacagccgacgcaagaggagcatcgtagag
gaggcggtcccggcggcgtgcaagacgcggacggtgatctacgagatccccaggagccag
gtggaccccacgtctgtcaacttcctgatatggccgccctgcgtggaggtgaaacgctgc
acaggctgttgcaacacgagcaacatgcgctgtcacccgtcccgcaagcaccatcgcacc
gttaaggtggcaaaggtggagtacgtgaagaggagacccaagctgaaagaggtctttgtg
cggttagaagaccacctggagtgtgtgtgcacgtcacaacatcatgtggtggagcactca
gatgcagaaatagtggacgtgaggtga
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